Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SH3TC2Q8TF17 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
SH3TC2Q8TF17 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 ELK2BP-201ENST00000415014 1224 ntBASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 MIR4745-201ENST00000577608 62 ntBASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 AC006504.4-201ENST00000592118 1568 ntBASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3TC2Q8TF17 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 PRYP5-201ENST00000451909 266 ntBASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SH3TC2Q8TF17 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3TC2Q8TF17 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SH3TC2Q8TF17 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.18■□□□□ 0.82
SH3TC2Q8TF17 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SH3TC2Q8TF17 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3TC2Q8TF17 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3TC2Q8TF17 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SH3TC2Q8TF17 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SH3TC2Q8TF17 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.18■□□□□ 0.82
SH3TC2Q8TF17 AC005498.2-205ENST00000593218 784 ntBASIC20.18■□□□□ 0.82
SH3TC2Q8TF17 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.18■□□□□ 0.82
SH3TC2Q8TF17 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SH3TC2Q8TF17 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SH3TC2Q8TF17 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms