Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 AL049812.1-201ENST00000432563 2267 ntBASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 INTS4P1-201ENST00000438455 1935 ntBASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF248Q8NDW4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 RNA5SP415-201ENST00000517246 115 ntBASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 SART3-203ENST00000546611 1184 ntBASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 AC134684.3-201ENST00000641758 218 ntBASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 Z98044.1-201ENST00000632503 1764 ntBASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ZNF248Q8NDW4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 KRT8P50-201ENST00000562022 1438 ntBASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 AL356309.3-201ENST00000624132 1934 ntBASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF248Q8NDW4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms