Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CFAP43Q8NDM7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CFAP43Q8NDM7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC27.8■■■□□ 2.04
CFAP43Q8NDM7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CFAP43Q8NDM7 BCRP1-201ENST00000444246 691 ntBASIC27.8■■■□□ 2.04
CFAP43Q8NDM7 AC108073.2-201ENST00000464002 357 ntBASIC27.8■■■□□ 2.04
CFAP43Q8NDM7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC27.8■■■□□ 2.04
CFAP43Q8NDM7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC27.8■■■□□ 2.04
CFAP43Q8NDM7 AC100803.2-201ENST00000562459 1963 ntBASIC27.8■■■□□ 2.04
CFAP43Q8NDM7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CFAP43Q8NDM7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CFAP43Q8NDM7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CFAP43Q8NDM7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 BX005266.1-201ENST00000473402 457 ntBASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 AC018845.2-201ENST00000568326 409 ntBASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CFAP43Q8NDM7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 PRSS29P-201ENST00000440800 595 ntBASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 KLF4P1-201ENST00000412782 1185 ntBASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 AC122714.2-201ENST00000502787 707 ntBASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 AL513190.1-201ENST00000621254 727 ntBASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 AC005593.1-201ENST00000624894 515 ntBASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC27.78■■■□□ 2.04
CFAP43Q8NDM7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CFAP43Q8NDM7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
CFAP43Q8NDM7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CFAP43Q8NDM7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CFAP43Q8NDM7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CFAP43Q8NDM7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CFAP43Q8NDM7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
CFAP43Q8NDM7 DUTP2-201ENST00000519164 463 ntBASIC27.77■■■□□ 2.04
CFAP43Q8NDM7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC27.77■■■□□ 2.04
CFAP43Q8NDM7 AL022326.1-202ENST00000641533 845 ntBASIC27.77■■■□□ 2.04
CFAP43Q8NDM7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
CFAP43Q8NDM7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC27.77■■■□□ 2.04
CFAP43Q8NDM7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CFAP43Q8NDM7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC27.77■■■□□ 2.04
CFAP43Q8NDM7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
CFAP43Q8NDM7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC27.76■■■□□ 2.03
CFAP43Q8NDM7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CFAP43Q8NDM7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC27.76■■■□□ 2.03
CFAP43Q8NDM7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC27.76■■■□□ 2.03
CFAP43Q8NDM7 EFTUD1P1-204ENST00000560401 1798 ntBASIC27.76■■■□□ 2.03
CFAP43Q8NDM7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC27.76■■■□□ 2.03
CFAP43Q8NDM7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CFAP43Q8NDM7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CFAP43Q8NDM7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CFAP43Q8NDM7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CFAP43Q8NDM7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC27.75■■■□□ 2.03
CFAP43Q8NDM7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CFAP43Q8NDM7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC27.75■■■□□ 2.03
CFAP43Q8NDM7 AC093028.1-201ENST00000622998 982 ntBASIC27.75■■■□□ 2.03
CFAP43Q8NDM7 AC148477.5-201ENST00000625164 1645 ntBASIC27.75■■■□□ 2.03
CFAP43Q8NDM7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CFAP43Q8NDM7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC27.75■■■□□ 2.03
CFAP43Q8NDM7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC27.75■■■□□ 2.03
CFAP43Q8NDM7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CFAP43Q8NDM7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CFAP43Q8NDM7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC27.75■■■□□ 2.03
CFAP43Q8NDM7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC27.75■■■□□ 2.03
CFAP43Q8NDM7 AD001527.2-201ENST00000622994 785 ntBASIC27.75■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms