Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC068880.1-201ENST00000507289 2297 ntBASIC19.99■□□□□ 0.79
USP38Q8NB14 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP38Q8NB14 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP38Q8NB14 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.99■□□□□ 0.79
USP38Q8NB14 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.98■□□□□ 0.79
USP38Q8NB14 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
USP38Q8NB14 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
USP38Q8NB14 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.98■□□□□ 0.79
USP38Q8NB14 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.98■□□□□ 0.79
USP38Q8NB14 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.98■□□□□ 0.79
USP38Q8NB14 AC091607.1-201ENST00000490318 1060 ntBASIC19.98■□□□□ 0.79
USP38Q8NB14 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.98■□□□□ 0.79
USP38Q8NB14 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.98■□□□□ 0.79
USP38Q8NB14 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
USP38Q8NB14 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.98■□□□□ 0.79
USP38Q8NB14 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
USP38Q8NB14 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.98■□□□□ 0.79
USP38Q8NB14 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.98■□□□□ 0.79
USP38Q8NB14 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP38Q8NB14 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP38Q8NB14 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP38Q8NB14 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.97■□□□□ 0.79
USP38Q8NB14 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.97■□□□□ 0.79
USP38Q8NB14 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP38Q8NB14 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP38Q8NB14 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
USP38Q8NB14 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP38Q8NB14 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
USP38Q8NB14 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP38Q8NB14 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP38Q8NB14 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.97■□□□□ 0.79
USP38Q8NB14 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP38Q8NB14 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP38Q8NB14 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP38Q8NB14 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.97■□□□□ 0.79
USP38Q8NB14 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.97■□□□□ 0.79
USP38Q8NB14 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP38Q8NB14 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
USP38Q8NB14 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.97■□□□□ 0.79
USP38Q8NB14 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP38Q8NB14 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
USP38Q8NB14 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP38Q8NB14 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP38Q8NB14 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.97■□□□□ 0.79
USP38Q8NB14 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP38Q8NB14 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.97■□□□□ 0.79
USP38Q8NB14 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP38Q8NB14 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.97■□□□□ 0.79
USP38Q8NB14 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP38Q8NB14 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP38Q8NB14 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP38Q8NB14 ZNF259P1-201ENST00000407656 1365 ntBASIC19.96■□□□□ 0.79
USP38Q8NB14 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.96■□□□□ 0.79
USP38Q8NB14 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP38Q8NB14 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP38Q8NB14 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP38Q8NB14 MYLKP1-201ENST00000509077 1580 ntBASIC19.96■□□□□ 0.79
USP38Q8NB14 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP38Q8NB14 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
USP38Q8NB14 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP38Q8NB14 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP38Q8NB14 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP38Q8NB14 RPSAP43-201ENST00000402237 625 ntBASIC19.96■□□□□ 0.79
USP38Q8NB14 AF186996.4-201ENST00000467186 377 ntBASIC19.96■□□□□ 0.79
USP38Q8NB14 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.96■□□□□ 0.79
USP38Q8NB14 AC093909.1-201ENST00000504731 1122 ntBASIC19.96■□□□□ 0.79
USP38Q8NB14 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.96■□□□□ 0.79
USP38Q8NB14 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.96■□□□□ 0.79
USP38Q8NB14 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.96■□□□□ 0.79
USP38Q8NB14 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.96■□□□□ 0.79
USP38Q8NB14 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP38Q8NB14 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP38Q8NB14 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP38Q8NB14 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.96■□□□□ 0.79
USP38Q8NB14 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
USP38Q8NB14 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP38Q8NB14 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP38Q8NB14 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.79
USP38Q8NB14 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP38Q8NB14 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP38Q8NB14 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.95■□□□□ 0.78
USP38Q8NB14 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms