Protein–RNA interactions for Protein: Q8N6N3

C1orf52, UPF0690 protein C1orf52, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf52Q8N6N3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 KRT18P48-201ENST00000434763 852 ntBASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 AC006011.2-201ENST00000621313 1158 ntBASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf52Q8N6N3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 RNF152P1-201ENST00000397754 604 ntBASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 FAM8A6P-201ENST00000407496 1135 ntBASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 TSPY5P-201ENST00000426936 936 ntBASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 KRT18P38-201ENST00000449496 1282 ntBASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf52Q8N6N3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
C1orf52Q8N6N3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
C1orf52Q8N6N3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 AK4P3-201ENST00000418260 669 ntBASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 KRT18P65-201ENST00000439811 1286 ntBASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 AL359075.1-203ENST00000462729 1002 ntBASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.14■□□□□ 0.33
C1orf52Q8N6N3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms