Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX5Q8N196 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX5Q8N196 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.3■□□□□ 0.52
SIX5Q8N196 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX5Q8N196 AC079776.2-201ENST00000641154 1609 ntBASIC18.3■□□□□ 0.52
SIX5Q8N196 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX5Q8N196 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX5Q8N196 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX5Q8N196 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SIX5Q8N196 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX5Q8N196 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX5Q8N196 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX5Q8N196 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX5Q8N196 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX5Q8N196 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SIX5Q8N196 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.29■□□□□ 0.52
SIX5Q8N196 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SIX5Q8N196 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SIX5Q8N196 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
SIX5Q8N196 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX5Q8N196 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SIX5Q8N196 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.29■□□□□ 0.52
SIX5Q8N196 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SIX5Q8N196 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX5Q8N196 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.29■□□□□ 0.52
SIX5Q8N196 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX5Q8N196 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX5Q8N196 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX5Q8N196 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SIX5Q8N196 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.29■□□□□ 0.52
SIX5Q8N196 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.29■□□□□ 0.52
SIX5Q8N196 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SIX5Q8N196 AC112698.1-201ENST00000510299 916 ntBASIC18.29■□□□□ 0.52
SIX5Q8N196 AC136632.2-201ENST00000512891 861 ntBASIC18.29■□□□□ 0.52
SIX5Q8N196 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.29■□□□□ 0.52
SIX5Q8N196 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.29■□□□□ 0.52
SIX5Q8N196 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.29■□□□□ 0.52
SIX5Q8N196 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.29■□□□□ 0.52
SIX5Q8N196 AC011467.4-201ENST00000594891 528 ntBASIC18.29■□□□□ 0.52
SIX5Q8N196 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.29■□□□□ 0.52
SIX5Q8N196 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.29■□□□□ 0.52
SIX5Q8N196 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.29■□□□□ 0.52
SIX5Q8N196 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.29■□□□□ 0.52
SIX5Q8N196 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SIX5Q8N196 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX5Q8N196 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX5Q8N196 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SIX5Q8N196 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIX5Q8N196 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIX5Q8N196 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX5Q8N196 AC125437.2-201ENST00000625180 2167 ntBASIC18.28■□□□□ 0.52
SIX5Q8N196 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX5Q8N196 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX5Q8N196 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.28■□□□□ 0.52
SIX5Q8N196 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIX5Q8N196 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX5Q8N196 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIX5Q8N196 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX5Q8N196 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.28■□□□□ 0.52
SIX5Q8N196 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.28■□□□□ 0.52
SIX5Q8N196 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX5Q8N196 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SIX5Q8N196 MIR770-201ENST00000390219 98 ntBASIC18.28■□□□□ 0.52
SIX5Q8N196 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SIX5Q8N196 AC073621.1-201ENST00000392730 636 ntBASIC18.28■□□□□ 0.52
SIX5Q8N196 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.28■□□□□ 0.52
SIX5Q8N196 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.28■□□□□ 0.52
SIX5Q8N196 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.28■□□□□ 0.52
SIX5Q8N196 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.28■□□□□ 0.52
SIX5Q8N196 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.28■□□□□ 0.52
SIX5Q8N196 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.28■□□□□ 0.52
SIX5Q8N196 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SIX5Q8N196 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.28■□□□□ 0.52
SIX5Q8N196 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.28■□□□□ 0.52
SIX5Q8N196 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.28■□□□□ 0.52
SIX5Q8N196 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.28■□□□□ 0.52
SIX5Q8N196 AC092865.6-201ENST00000642101 219 ntBASIC18.28■□□□□ 0.52
SIX5Q8N196 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
SIX5Q8N196 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SIX5Q8N196 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIX5Q8N196 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX5Q8N196 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIX5Q8N196 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.28■□□□□ 0.52
SIX5Q8N196 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.28■□□□□ 0.52
SIX5Q8N196 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
SIX5Q8N196 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX5Q8N196 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX5Q8N196 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX5Q8N196 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.27■□□□□ 0.52
SIX5Q8N196 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.27■□□□□ 0.52
SIX5Q8N196 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.27■□□□□ 0.52
SIX5Q8N196 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.27■□□□□ 0.52
SIX5Q8N196 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
SIX5Q8N196 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIX5Q8N196 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
SIX5Q8N196 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms