Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 LINC00167-201ENST00000530583 1419 ntBASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.88■□□□□ 0.13
LINC00346Q8IVM7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 RASA4DP-201ENST00000460726 1199 ntBASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 COX11P1-201ENST00000489116 835 ntBASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 AL441883.1-201ENST00000566170 1045 ntBASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 AC008687.5-201ENST00000593746 558 ntBASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 AC073912.3-201ENST00000624414 853 ntBASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00346Q8IVM7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00346Q8IVM7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms