Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 AL160286.2-201ENST00000567150 934 ntBASIC14.91□□□□□ -0.02
ZNF546Q86UE3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.91□□□□□ -0.02
ZNF546Q86UE3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF546Q86UE3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 AF201337.1-201ENST00000520239 748 ntBASIC14.9□□□□□ -0.02
ZNF546Q86UE3 AC006557.6-201ENST00000623071 864 ntBASIC14.9□□□□□ -0.02
ZNF546Q86UE3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ZNF546Q86UE3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms