Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 AL592071.1-201ENST00000611956 408 ntBASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 LINC00304-203ENST00000565008 1864 ntBASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 AL355312.1-201ENST00000407115 2176 ntBASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 REXO1L11P-201ENST00000620964 1927 ntBASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 AL845331.1-201ENST00000424978 1190 ntBASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 LINC01451-201ENST00000623792 534 ntBASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 LETM1P2-201ENST00000597330 2178 ntBASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COLCA1Q6ZS62 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 AC016734.2-201ENST00000624325 1377 ntBASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 PCED1CP-201ENST00000419887 785 ntBASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 AC087388.1-201ENST00000571370 1112 ntBASIC15.38■□□□□ 0.05
COLCA1Q6ZS62 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms