Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.11■□□□□ 0.17
NHLRC1Q6VVB1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 AC083849.1-201ENST00000615227 514 ntBASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 LINC00602-201ENST00000629776 2065 ntBASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NHLRC1Q6VVB1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 AC006116.8-202ENST00000587620 1550 ntBASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NHLRC1Q6VVB1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms