Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC62Q6P9F0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC62Q6P9F0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC62Q6P9F0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC62Q6P9F0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC62Q6P9F0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC62Q6P9F0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC62Q6P9F0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 IGHV3-22-201ENST00000520721 359 ntBASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 AC012640.2-201ENST00000561606 901 ntBASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 GPALPP1-207ENST00000611650 899 ntBASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 AC117500.6-201ENST00000624871 588 ntBASIC20.08■□□□□ 0.81
CCDC62Q6P9F0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC62Q6P9F0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC62Q6P9F0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.08■□□□□ 0.8
CCDC62Q6P9F0 AC090340.1-201ENST00000620778 4980 ntBASIC20.08■□□□□ 0.8
CCDC62Q6P9F0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
CCDC62Q6P9F0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC62Q6P9F0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.08■□□□□ 0.8
CCDC62Q6P9F0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.08■□□□□ 0.8
CCDC62Q6P9F0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC62Q6P9F0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC62Q6P9F0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 KRT18P58-201ENST00000527480 1120 ntBASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC62Q6P9F0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 AC122714.2-201ENST00000502787 707 ntBASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 PMPCAP1-201ENST00000508114 1576 ntBASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC62Q6P9F0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 AC145285.3-201ENST00000564603 959 ntBASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 AD001527.2-201ENST00000622994 785 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms