Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 NCF1C-201ENST00000438382 1427 ntBASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 HTR5BP-201ENST00000430851 1154 ntBASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 AC018845.2-201ENST00000568326 409 ntBASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.5■□□□□ 0.39
LYSMD4Q5XG99 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 CNN2P11-201ENST00000429351 262 ntBASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 PRSS29P-201ENST00000440800 595 ntBASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD4Q5XG99 SIRPAP1-201ENST00000448467 1770 ntBASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 MKNK2P1-201ENST00000437526 628 ntBASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 HCG4B-203ENST00000450128 991 ntBASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 RPS15P9-201ENST00000494093 319 ntBASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 IGHV3-65-201ENST00000523210 341 ntBASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 AC008667.4-201ENST00000607370 168 ntBASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 AL078644.1-201ENST00000609881 752 ntBASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD4Q5XG99 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 MIR3197-201ENST00000582241 73 ntBASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 AL513190.1-201ENST00000621254 727 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms