Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 TTTY23B-201ENST00000442790 549 ntBASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 FAM185BP-201ENST00000443595 716 ntBASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 AL583810.1-201ENST00000553344 1045 ntBASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 AL138828.2-201ENST00000615812 383 ntBASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 Z98044.1-201ENST00000632503 1764 ntBASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 EP400NL-214ENST00000641289 2402 ntBASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 IGHV3-62-201ENST00000520057 340 ntBASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 HNRNPUP1-201ENST00000554987 333 ntBASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.92■□□□□ 0.78
COL13A1Q5TAT6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 AC099343.3-201ENST00000605834 2503 ntBASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.91■□□□□ 0.78
COL13A1Q5TAT6 AL691432.2-201ENST00000607222 2038 ntBASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 BRWD1P1-201ENST00000401091 371 ntBASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 KRT18P65-201ENST00000439811 1286 ntBASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 RN7SL837P-201ENST00000463010 287 ntBASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 MIR4453-201ENST00000584019 89 ntBASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
COL13A1Q5TAT6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL13A1Q5TAT6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL13A1Q5TAT6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL13A1Q5TAT6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.89■□□□□ 0.77
COL13A1Q5TAT6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
COL13A1Q5TAT6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.89■□□□□ 0.77
COL13A1Q5TAT6 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.89■□□□□ 0.77
COL13A1Q5TAT6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL13A1Q5TAT6 AC122714.2-201ENST00000502787 707 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms