Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.52■□□□□ 0.88
USH1GQ495M9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
USH1GQ495M9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USH1GQ495M9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
USH1GQ495M9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USH1GQ495M9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
USH1GQ495M9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USH1GQ495M9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
USH1GQ495M9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.52■□□□□ 0.88
USH1GQ495M9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.52■□□□□ 0.87
USH1GQ495M9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.52■□□□□ 0.87
USH1GQ495M9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
USH1GQ495M9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
USH1GQ495M9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
USH1GQ495M9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.51■□□□□ 0.87
USH1GQ495M9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.51■□□□□ 0.87
USH1GQ495M9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 AP000997.3-201ENST00000623333 2250 ntBASIC20.51■□□□□ 0.87
USH1GQ495M9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
USH1GQ495M9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
USH1GQ495M9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.51■□□□□ 0.87
USH1GQ495M9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.51■□□□□ 0.87
USH1GQ495M9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.51■□□□□ 0.87
USH1GQ495M9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.51■□□□□ 0.87
USH1GQ495M9 MTDHP3-201ENST00000594186 672 ntBASIC20.51■□□□□ 0.87
USH1GQ495M9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.51■□□□□ 0.87
USH1GQ495M9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
USH1GQ495M9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
USH1GQ495M9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
USH1GQ495M9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USH1GQ495M9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.51■□□□□ 0.87
USH1GQ495M9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.5■□□□□ 0.87
USH1GQ495M9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
USH1GQ495M9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USH1GQ495M9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
USH1GQ495M9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USH1GQ495M9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
USH1GQ495M9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.5■□□□□ 0.87
USH1GQ495M9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USH1GQ495M9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USH1GQ495M9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
USH1GQ495M9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USH1GQ495M9 FAM197Y8-203ENST00000450145 560 ntBASIC20.5■□□□□ 0.87
USH1GQ495M9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
USH1GQ495M9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.5■□□□□ 0.87
USH1GQ495M9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
USH1GQ495M9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USH1GQ495M9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.5■□□□□ 0.87
USH1GQ495M9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.5■□□□□ 0.87
USH1GQ495M9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
USH1GQ495M9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USH1GQ495M9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
USH1GQ495M9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
USH1GQ495M9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USH1GQ495M9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.5■□□□□ 0.87
USH1GQ495M9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.5■□□□□ 0.87
USH1GQ495M9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USH1GQ495M9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USH1GQ495M9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USH1GQ495M9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
USH1GQ495M9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
USH1GQ495M9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.49■□□□□ 0.87
USH1GQ495M9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
USH1GQ495M9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.49■□□□□ 0.87
USH1GQ495M9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USH1GQ495M9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USH1GQ495M9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USH1GQ495M9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
USH1GQ495M9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
USH1GQ495M9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.49■□□□□ 0.87
USH1GQ495M9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.49■□□□□ 0.87
USH1GQ495M9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.49■□□□□ 0.87
USH1GQ495M9 AL355877.3-201ENST00000622820 899 ntBASIC20.49■□□□□ 0.87
USH1GQ495M9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.49■□□□□ 0.87
USH1GQ495M9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USH1GQ495M9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.49■□□□□ 0.87
USH1GQ495M9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USH1GQ495M9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USH1GQ495M9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USH1GQ495M9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USH1GQ495M9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.49■□□□□ 0.87
USH1GQ495M9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USH1GQ495M9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USH1GQ495M9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
USH1GQ495M9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms