Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 AC116407.2-201ENST00000613639 860 ntBASIC21.61■■□□□ 1.05
RFX7Q2KHR2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.61■■□□□ 1.05
RFX7Q2KHR2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 AC096633.1-201ENST00000422446 749 ntBASIC21.6■■□□□ 1.05
RFX7Q2KHR2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.6■■□□□ 1.05
RFX7Q2KHR2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 GNAS-203ENST00000306120 1878 ntBASIC21.59■■□□□ 1.05
RFX7Q2KHR2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 AC018712.1-201ENST00000455767 687 ntBASIC21.59■■□□□ 1.05
RFX7Q2KHR2 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 MIR5100-201ENST00000579544 119 ntBASIC21.59■■□□□ 1.05
RFX7Q2KHR2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFX7Q2KHR2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFX7Q2KHR2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFX7Q2KHR2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
RFX7Q2KHR2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFX7Q2KHR2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.58■■□□□ 1.05
RFX7Q2KHR2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFX7Q2KHR2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFX7Q2KHR2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFX7Q2KHR2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFX7Q2KHR2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.58■■□□□ 1.04
RFX7Q2KHR2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RFX7Q2KHR2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RFX7Q2KHR2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RFX7Q2KHR2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.58■■□□□ 1.04
RFX7Q2KHR2 MIR7706-201ENST00000613747 67 ntBASIC21.58■■□□□ 1.04
RFX7Q2KHR2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms