Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 MIR662-201ENST00000384847 95 ntBASIC18.11■□□□□ 0.49
CDH17Q12864 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH17Q12864 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.11■□□□□ 0.49
CDH17Q12864 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH17Q12864 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.11■□□□□ 0.49
CDH17Q12864 AC112907.2-201ENST00000448639 330 ntBASIC18.11■□□□□ 0.49
CDH17Q12864 AC092647.4-201ENST00000457211 535 ntBASIC18.11■□□□□ 0.49
CDH17Q12864 AL359075.1-203ENST00000462729 1002 ntBASIC18.11■□□□□ 0.49
CDH17Q12864 AP003733.1-201ENST00000491725 852 ntBASIC18.11■□□□□ 0.49
CDH17Q12864 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH17Q12864 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH17Q12864 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.11■□□□□ 0.49
CDH17Q12864 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH17Q12864 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH17Q12864 AC009154.2-201ENST00000621177 724 ntBASIC18.11■□□□□ 0.49
CDH17Q12864 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH17Q12864 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH17Q12864 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH17Q12864 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CDH17Q12864 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDH17Q12864 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDH17Q12864 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH17Q12864 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH17Q12864 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH17Q12864 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CDH17Q12864 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CDH17Q12864 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDH17Q12864 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 IGHGP-201ENST00000390555 1178 ntBASIC18.1■□□□□ 0.49
CDH17Q12864 TSPY12P-201ENST00000421279 868 ntBASIC18.1■□□□□ 0.49
CDH17Q12864 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH17Q12864 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH17Q12864 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH17Q12864 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH17Q12864 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.1■□□□□ 0.49
CDH17Q12864 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDH17Q12864 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDH17Q12864 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH17Q12864 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH17Q12864 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH17Q12864 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CDH17Q12864 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH17Q12864 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH17Q12864 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
CDH17Q12864 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH17Q12864 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH17Q12864 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH17Q12864 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH17Q12864 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH17Q12864 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH17Q12864 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH17Q12864 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH17Q12864 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH17Q12864 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDH17Q12864 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH17Q12864 AL355312.1-201ENST00000407115 2176 ntBASIC18.09■□□□□ 0.49
CDH17Q12864 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH17Q12864 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH17Q12864 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH17Q12864 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH17Q12864 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH17Q12864 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.09■□□□□ 0.49
CDH17Q12864 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH17Q12864 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH17Q12864 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CDH17Q12864 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH17Q12864 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH17Q12864 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH17Q12864 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH17Q12864 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH17Q12864 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CDH17Q12864 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH17Q12864 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH17Q12864 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH17Q12864 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH17Q12864 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH17Q12864 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.08■□□□□ 0.49
CDH17Q12864 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.08■□□□□ 0.49
CDH17Q12864 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CDH17Q12864 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.08■□□□□ 0.49
CDH17Q12864 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms