Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.75□□□□□ -0.21
HIST1H1AQ02539 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 MIR1238-201ENST00000408483 83 ntBASIC13.74□□□□□ -0.21
HIST1H1AQ02539 SNORA78-201ENST00000459373 127 ntBASIC13.74□□□□□ -0.21
HIST1H1AQ02539 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H1AQ02539 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 C2orf69P3-201ENST00000565542 1120 ntBASIC13.73□□□□□ -0.21
HIST1H1AQ02539 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 AC116562.4-202ENST00000641738 218 ntBASIC13.73□□□□□ -0.21
HIST1H1AQ02539 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 AL162727.3-201ENST00000635661 2787 ntBASIC13.73□□□□□ -0.21
HIST1H1AQ02539 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.73□□□□□ -0.21
HIST1H1AQ02539 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 AC009102.3-201ENST00000623118 1491 ntBASIC13.73□□□□□ -0.21
HIST1H1AQ02539 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HIST1H1AQ02539 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 KRT17P2-201ENST00000300992 1314 ntBASIC13.72□□□□□ -0.21
HIST1H1AQ02539 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms