Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.09■□□□□ 0.81
TPM4P67936 AC006058.3-201ENST00000606217 1069 ntBASIC20.09■□□□□ 0.81
TPM4P67936 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 AP001094.4-201ENST00000579008 2176 ntBASIC20.09■□□□□ 0.81
TPM4P67936 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.09■□□□□ 0.81
TPM4P67936 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TPM4P67936 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.09■□□□□ 0.81
TPM4P67936 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TPM4P67936 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TPM4P67936 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.81
TPM4P67936 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.08■□□□□ 0.81
TPM4P67936 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TPM4P67936 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM4P67936 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM4P67936 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.08■□□□□ 0.81
TPM4P67936 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TPM4P67936 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TPM4P67936 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TPM4P67936 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM4P67936 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM4P67936 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM4P67936 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.08■□□□□ 0.81
TPM4P67936 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM4P67936 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TPM4P67936 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM4P67936 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TPM4P67936 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM4P67936 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.08■□□□□ 0.81
TPM4P67936 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.08■□□□□ 0.81
TPM4P67936 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM4P67936 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM4P67936 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
TPM4P67936 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM4P67936 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM4P67936 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TPM4P67936 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM4P67936 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM4P67936 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.08■□□□□ 0.8
TPM4P67936 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TPM4P67936 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM4P67936 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM4P67936 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TPM4P67936 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TPM4P67936 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
TPM4P67936 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.07■□□□□ 0.8
TPM4P67936 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.07■□□□□ 0.8
TPM4P67936 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TPM4P67936 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TPM4P67936 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.07■□□□□ 0.8
TPM4P67936 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.07■□□□□ 0.8
TPM4P67936 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 DUTP2-201ENST00000519164 463 ntBASIC20.07■□□□□ 0.8
TPM4P67936 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.07■□□□□ 0.8
TPM4P67936 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.07■□□□□ 0.8
TPM4P67936 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.07■□□□□ 0.8
TPM4P67936 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.07■□□□□ 0.8
TPM4P67936 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.07■□□□□ 0.8
TPM4P67936 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TPM4P67936 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.07■□□□□ 0.8
TPM4P67936 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
TPM4P67936 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM4P67936 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.07■□□□□ 0.8
TPM4P67936 AC084018.2-201ENST00000613093 2607 ntBASIC20.06■□□□□ 0.8
TPM4P67936 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.06■□□□□ 0.8
TPM4P67936 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TPM4P67936 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TPM4P67936 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM4P67936 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.06■□□□□ 0.8
TPM4P67936 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM4P67936 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM4P67936 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.06■□□□□ 0.8
TPM4P67936 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM4P67936 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.06■□□□□ 0.8
TPM4P67936 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.06■□□□□ 0.8
TPM4P67936 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TPM4P67936 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TPM4P67936 HLA-L-209ENST00000420110 1011 ntBASIC20.06■□□□□ 0.8
TPM4P67936 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.06■□□□□ 0.8
TPM4P67936 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.06■□□□□ 0.8
TPM4P67936 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms