Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH11P55287 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CDH11P55287 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH11P55287 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH11P55287 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH11P55287 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH11P55287 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH11P55287 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CDH11P55287 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH11P55287 AC108860.2-201ENST00000562760 2183 ntBASIC16.43■□□□□ 0.22
CDH11P55287 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CDH11P55287 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH11P55287 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CDH11P55287 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 AL023284.2-201ENST00000405850 579 ntBASIC16.43■□□□□ 0.22
CDH11P55287 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
CDH11P55287 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH11P55287 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH11P55287 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 AC092647.4-201ENST00000457211 535 ntBASIC16.43■□□□□ 0.22
CDH11P55287 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH11P55287 AC022616.7-201ENST00000525383 220 ntBASIC16.43■□□□□ 0.22
CDH11P55287 AP003041.3-201ENST00000527151 707 ntBASIC16.43■□□□□ 0.22
CDH11P55287 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH11P55287 AC139887.4-201ENST00000607877 719 ntBASIC16.43■□□□□ 0.22
CDH11P55287 AL138966.2-201ENST00000621997 464 ntBASIC16.43■□□□□ 0.22
CDH11P55287 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CDH11P55287 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CDH11P55287 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH11P55287 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.43■□□□□ 0.22
CDH11P55287 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CDH11P55287 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH11P55287 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CDH11P55287 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH11P55287 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH11P55287 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CDH11P55287 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDH11P55287 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.42■□□□□ 0.22
CDH11P55287 OR6D1P-203ENST00000641209 4860 ntBASIC16.42■□□□□ 0.22
CDH11P55287 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH11P55287 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH11P55287 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH11P55287 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH11P55287 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH11P55287 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH11P55287 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CDH11P55287 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH11P55287 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH11P55287 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.42■□□□□ 0.22
CDH11P55287 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH11P55287 COX11P1-201ENST00000489116 835 ntBASIC16.42■□□□□ 0.22
CDH11P55287 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
CDH11P55287 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDH11P55287 AC141257.4-201ENST00000634557 245 ntBASIC16.42■□□□□ 0.22
CDH11P55287 AC136944.6-201ENST00000634818 245 ntBASIC16.42■□□□□ 0.22
CDH11P55287 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CDH11P55287 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CDH11P55287 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CDH11P55287 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH11P55287 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDH11P55287 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH11P55287 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH11P55287 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDH11P55287 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CDH11P55287 PP12613-201ENST00000424958 2230 ntBASIC16.42■□□□□ 0.22
CDH11P55287 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.42■□□□□ 0.22
CDH11P55287 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CDH11P55287 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CDH11P55287 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH11P55287 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH11P55287 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH11P55287 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH11P55287 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH11P55287 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CDH11P55287 PCDHA12-202ENST00000613593 2588 ntBASIC16.41■□□□□ 0.22
CDH11P55287 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms