Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
HADHBP55084 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.73■□□□□ 0.59
HADHBP55084 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HADHBP55084 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.73■□□□□ 0.59
HADHBP55084 STARP1-201ENST00000397973 869 ntBASIC18.73■□□□□ 0.59
HADHBP55084 AL596275.1-201ENST00000423464 877 ntBASIC18.73■□□□□ 0.59
HADHBP55084 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.73■□□□□ 0.59
HADHBP55084 AL441883.1-201ENST00000566170 1045 ntBASIC18.73■□□□□ 0.59
HADHBP55084 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.73■□□□□ 0.59
HADHBP55084 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.73■□□□□ 0.59
HADHBP55084 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HADHBP55084 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HADHBP55084 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HADHBP55084 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.73■□□□□ 0.59
HADHBP55084 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HADHBP55084 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HADHBP55084 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HADHBP55084 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HADHBP55084 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HADHBP55084 AC016396.2-201ENST00000562575 1417 ntBASIC18.73■□□□□ 0.59
HADHBP55084 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.73■□□□□ 0.59
HADHBP55084 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
HADHBP55084 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.73■□□□□ 0.59
HADHBP55084 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HADHBP55084 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.73■□□□□ 0.59
HADHBP55084 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.72■□□□□ 0.59
HADHBP55084 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HADHBP55084 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HADHBP55084 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HADHBP55084 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
HADHBP55084 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HADHBP55084 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HADHBP55084 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.72■□□□□ 0.59
HADHBP55084 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
HADHBP55084 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HADHBP55084 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.72■□□□□ 0.59
HADHBP55084 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.72■□□□□ 0.59
HADHBP55084 KRT18P48-201ENST00000434763 852 ntBASIC18.72■□□□□ 0.59
HADHBP55084 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HADHBP55084 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.72■□□□□ 0.59
HADHBP55084 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.72■□□□□ 0.59
HADHBP55084 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.72■□□□□ 0.59
HADHBP55084 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.72■□□□□ 0.59
HADHBP55084 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HADHBP55084 AC022211.2-201ENST00000585075 2527 ntBASIC18.72■□□□□ 0.59
HADHBP55084 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HADHBP55084 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HADHBP55084 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HADHBP55084 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.72■□□□□ 0.59
HADHBP55084 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HADHBP55084 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.72■□□□□ 0.59
HADHBP55084 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HADHBP55084 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.71■□□□□ 0.59
HADHBP55084 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.71■□□□□ 0.59
HADHBP55084 AC087499.1-201ENST00000418141 1075 ntBASIC18.71■□□□□ 0.59
HADHBP55084 SPDYE15P-201ENST00000424157 909 ntBASIC18.71■□□□□ 0.59
HADHBP55084 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 AC140113.3-201ENST00000605663 199 ntBASIC18.71■□□□□ 0.59
HADHBP55084 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.71■□□□□ 0.59
HADHBP55084 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.71■□□□□ 0.59
HADHBP55084 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.71■□□□□ 0.59
HADHBP55084 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.71■□□□□ 0.59
HADHBP55084 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HADHBP55084 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
HADHBP55084 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HADHBP55084 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HADHBP55084 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HADHBP55084 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.7■□□□□ 0.58
HADHBP55084 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.7■□□□□ 0.58
HADHBP55084 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HADHBP55084 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HADHBP55084 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HADHBP55084 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HADHBP55084 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HADHBP55084 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
HADHBP55084 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.7■□□□□ 0.58
HADHBP55084 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HADHBP55084 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HADHBP55084 TSPY12P-201ENST00000421279 868 ntBASIC18.7■□□□□ 0.58
HADHBP55084 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HADHBP55084 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.7■□□□□ 0.58
HADHBP55084 COX11P1-201ENST00000489116 835 ntBASIC18.7■□□□□ 0.58
HADHBP55084 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.7■□□□□ 0.58
HADHBP55084 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms