Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AP000974.1-201ENST00000623909 2387 ntBASIC25.45■■□□□ 1.67
CLTCL1P53675 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CLTCL1P53675 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
CLTCL1P53675 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
CLTCL1P53675 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC25.45■■□□□ 1.67
CLTCL1P53675 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC25.45■■□□□ 1.67
CLTCL1P53675 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC25.45■■□□□ 1.67
CLTCL1P53675 DNAJB3-202ENST00000449667 1266 ntBASIC25.45■■□□□ 1.67
CLTCL1P53675 HCG4B-203ENST00000450128 991 ntBASIC25.45■■□□□ 1.67
CLTCL1P53675 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC25.45■■□□□ 1.67
CLTCL1P53675 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC25.45■■□□□ 1.67
CLTCL1P53675 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CLTCL1P53675 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
CLTCL1P53675 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CLTCL1P53675 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC25.45■■□□□ 1.66
CLTCL1P53675 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CLTCL1P53675 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
CLTCL1P53675 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC25.45■■□□□ 1.66
CLTCL1P53675 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CLTCL1P53675 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC25.45■■□□□ 1.66
CLTCL1P53675 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CLTCL1P53675 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CLTCL1P53675 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CLTCL1P53675 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CLTCL1P53675 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CLTCL1P53675 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CLTCL1P53675 AP006288.1-201ENST00000446065 395 ntBASIC25.45■■□□□ 1.66
CLTCL1P53675 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CLTCL1P53675 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC25.45■■□□□ 1.66
CLTCL1P53675 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC25.45■■□□□ 1.66
CLTCL1P53675 MIR4751-201ENST00000578027 74 ntBASIC25.45■■□□□ 1.66
CLTCL1P53675 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CLTCL1P53675 AC010507.1-201ENST00000633895 436 ntBASIC25.45■■□□□ 1.66
CLTCL1P53675 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC25.44■■□□□ 1.66
CLTCL1P53675 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
CLTCL1P53675 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CLTCL1P53675 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC25.44■■□□□ 1.66
CLTCL1P53675 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CLTCL1P53675 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC25.44■■□□□ 1.66
CLTCL1P53675 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC25.44■■□□□ 1.66
CLTCL1P53675 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC25.44■■□□□ 1.66
CLTCL1P53675 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CLTCL1P53675 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC25.44■■□□□ 1.66
CLTCL1P53675 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CLTCL1P53675 PMS2P2-201ENST00000425039 1128 ntBASIC25.44■■□□□ 1.66
CLTCL1P53675 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC25.44■■□□□ 1.66
CLTCL1P53675 AC112482.1-201ENST00000492080 688 ntBASIC25.44■■□□□ 1.66
CLTCL1P53675 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CLTCL1P53675 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC25.44■■□□□ 1.66
CLTCL1P53675 AC134684.3-201ENST00000641758 218 ntBASIC25.44■■□□□ 1.66
CLTCL1P53675 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CLTCL1P53675 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC25.44■■□□□ 1.66
CLTCL1P53675 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC25.44■■□□□ 1.66
CLTCL1P53675 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC25.44■■□□□ 1.66
CLTCL1P53675 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
CLTCL1P53675 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CLTCL1P53675 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CLTCL1P53675 COA5-202ENST00000409997 557 ntTSL 4 BASIC25.43■■□□□ 1.66
CLTCL1P53675 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
CLTCL1P53675 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC25.43■■□□□ 1.66
CLTCL1P53675 AL513190.1-201ENST00000621254 727 ntBASIC25.43■■□□□ 1.66
CLTCL1P53675 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CLTCL1P53675 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC25.43■■□□□ 1.66
CLTCL1P53675 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC25.43■■□□□ 1.66
CLTCL1P53675 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CLTCL1P53675 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC25.43■■□□□ 1.66
CLTCL1P53675 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC25.43■■□□□ 1.66
CLTCL1P53675 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CLTCL1P53675 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC25.42■■□□□ 1.66
CLTCL1P53675 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CLTCL1P53675 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
CLTCL1P53675 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CLTCL1P53675 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
CLTCL1P53675 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CLTCL1P53675 MCCD1P2-201ENST00000423228 335 ntBASIC25.42■■□□□ 1.66
CLTCL1P53675 HMGN1P19-201ENST00000436976 333 ntBASIC25.42■■□□□ 1.66
CLTCL1P53675 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC25.42■■□□□ 1.66
CLTCL1P53675 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC25.42■■□□□ 1.66
CLTCL1P53675 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC25.42■■□□□ 1.66
CLTCL1P53675 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC25.42■■□□□ 1.66
CLTCL1P53675 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC25.42■■□□□ 1.66
CLTCL1P53675 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC25.42■■□□□ 1.66
CLTCL1P53675 AC010654.1-201ENST00000615722 808 ntBASIC25.42■■□□□ 1.66
CLTCL1P53675 AC092865.6-201ENST00000642101 219 ntBASIC25.42■■□□□ 1.66
CLTCL1P53675 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC25.42■■□□□ 1.66
CLTCL1P53675 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC25.42■■□□□ 1.66
CLTCL1P53675 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CLTCL1P53675 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CLTCL1P53675 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
CLTCL1P53675 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC25.42■■□□□ 1.66
CLTCL1P53675 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC25.42■■□□□ 1.66
CLTCL1P53675 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CLTCL1P53675 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
CLTCL1P53675 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC25.41■■□□□ 1.66
CLTCL1P53675 YBX1P5-201ENST00000509441 847 ntBASIC25.41■■□□□ 1.66
CLTCL1P53675 IGHV3-65-201ENST00000523210 341 ntBASIC25.41■■□□□ 1.66
CLTCL1P53675 COX5A-206ENST00000568783 571 ntTSL 3 BASIC25.41■■□□□ 1.66
CLTCL1P53675 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
CLTCL1P53675 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC25.41■■□□□ 1.66
CLTCL1P53675 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms