Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 C2orf69P3-201ENST00000565542 1120 ntBASIC16.34■□□□□ 0.21
HMGA2P52926 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGA2P52926 Z99916.2-201ENST00000604037 246 ntBASIC16.34■□□□□ 0.21
HMGA2P52926 AC024243.1-201ENST00000609234 778 ntBASIC16.34■□□□□ 0.21
HMGA2P52926 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGA2P52926 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGA2P52926 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGA2P52926 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGA2P52926 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGA2P52926 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HMGA2P52926 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGA2P52926 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGA2P52926 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGA2P52926 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGA2P52926 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGA2P52926 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGA2P52926 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGA2P52926 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HMGA2P52926 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGA2P52926 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGA2P52926 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGA2P52926 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGA2P52926 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGA2P52926 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.33■□□□□ 0.21
HMGA2P52926 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.33■□□□□ 0.21
HMGA2P52926 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HMGA2P52926 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HMGA2P52926 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HMGA2P52926 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.33■□□□□ 0.21
HMGA2P52926 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HMGA2P52926 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGA2P52926 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGA2P52926 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGA2P52926 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGA2P52926 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGA2P52926 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGA2P52926 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.33■□□□□ 0.2
HMGA2P52926 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGA2P52926 KRT18P65-201ENST00000439811 1286 ntBASIC16.33■□□□□ 0.2
HMGA2P52926 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.33■□□□□ 0.2
HMGA2P52926 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
HMGA2P52926 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.33■□□□□ 0.2
HMGA2P52926 EGLN1P1-201ENST00000531623 762 ntBASIC16.33■□□□□ 0.2
HMGA2P52926 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMGA2P52926 NEK4P2-201ENST00000580004 1012 ntBASIC16.33■□□□□ 0.2
HMGA2P52926 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGA2P52926 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMGA2P52926 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
HMGA2P52926 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HMGA2P52926 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGA2P52926 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGA2P52926 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.33■□□□□ 0.2
HMGA2P52926 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
HMGA2P52926 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMGA2P52926 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMGA2P52926 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGA2P52926 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGA2P52926 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGA2P52926 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGA2P52926 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
HMGA2P52926 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGA2P52926 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HMGA2P52926 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMGA2P52926 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGA2P52926 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGA2P52926 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGA2P52926 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGA2P52926 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMGA2P52926 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HMGA2P52926 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGA2P52926 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HMGA2P52926 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGA2P52926 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGA2P52926 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGA2P52926 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.32■□□□□ 0.2
HMGA2P52926 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGA2P52926 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMGA2P52926 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HMGA2P52926 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HMGA2P52926 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGA2P52926 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.32■□□□□ 0.2
HMGA2P52926 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.32■□□□□ 0.2
HMGA2P52926 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.32■□□□□ 0.2
HMGA2P52926 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMGA2P52926 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HMGA2P52926 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.32■□□□□ 0.2
HMGA2P52926 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.32■□□□□ 0.2
HMGA2P52926 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.32■□□□□ 0.2
HMGA2P52926 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.32■□□□□ 0.2
HMGA2P52926 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.32■□□□□ 0.2
HMGA2P52926 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.32■□□□□ 0.2
HMGA2P52926 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.32■□□□□ 0.2
HMGA2P52926 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMGA2P52926 AC092865.7-201ENST00000641832 219 ntBASIC16.32■□□□□ 0.2
HMGA2P52926 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGA2P52926 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGA2P52926 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGA2P52926 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HMGA2P52926 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HMGA2P52926 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms