Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC11.39□□□□□ -0.59
UBE2AP49459 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC11.39□□□□□ -0.59
UBE2AP49459 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 PCDHB18P-201ENST00000524813 2368 ntBASIC11.39□□□□□ -0.59
UBE2AP49459 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
UBE2AP49459 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2AP49459 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC11.39□□□□□ -0.59
UBE2AP49459 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC11.39□□□□□ -0.59
UBE2AP49459 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
UBE2AP49459 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 AC009102.3-201ENST00000623118 1491 ntBASIC11.38□□□□□ -0.59
UBE2AP49459 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
UBE2AP49459 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
UBE2AP49459 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.38□□□□□ -0.59
UBE2AP49459 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
UBE2AP49459 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
UBE2AP49459 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.38□□□□□ -0.59
UBE2AP49459 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
UBE2AP49459 KRT8P7-201ENST00000533003 1432 ntBASIC11.38□□□□□ -0.59
UBE2AP49459 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
UBE2AP49459 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC11.38□□□□□ -0.59
UBE2AP49459 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
UBE2AP49459 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC11.38□□□□□ -0.59
UBE2AP49459 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC11.38□□□□□ -0.59
UBE2AP49459 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC11.38□□□□□ -0.59
UBE2AP49459 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.38□□□□□ -0.59
UBE2AP49459 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
UBE2AP49459 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
UBE2AP49459 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC11.38□□□□□ -0.59
UBE2AP49459 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
UBE2AP49459 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.38□□□□□ -0.59
UBE2AP49459 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
UBE2AP49459 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
UBE2AP49459 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2AP49459 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2AP49459 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2AP49459 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2AP49459 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
UBE2AP49459 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2AP49459 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2AP49459 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2AP49459 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2AP49459 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC11.37□□□□□ -0.59
UBE2AP49459 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
UBE2AP49459 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC11.37□□□□□ -0.59
UBE2AP49459 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
UBE2AP49459 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
UBE2AP49459 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
UBE2AP49459 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
UBE2AP49459 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2AP49459 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2AP49459 CYP51A1P1-201ENST00000492267 1507 ntBASIC11.37□□□□□ -0.59
UBE2AP49459 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
UBE2AP49459 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2AP49459 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2AP49459 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
UBE2AP49459 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC11.37□□□□□ -0.59
UBE2AP49459 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2AP49459 MIR149-201ENST00000384879 89 ntBASIC11.37□□□□□ -0.59
UBE2AP49459 GXYLT1P6-201ENST00000456472 1187 ntBASIC11.37□□□□□ -0.59
UBE2AP49459 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC11.37□□□□□ -0.59
UBE2AP49459 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC11.37□□□□□ -0.59
UBE2AP49459 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2AP49459 AL355075.4-201ENST00000554988 638 ntBASIC11.37□□□□□ -0.59
UBE2AP49459 MIR4497-201ENST00000583208 89 ntBASIC11.37□□□□□ -0.59
UBE2AP49459 GPX4-207ENST00000589115 812 ntTSL 2 BASIC11.37□□□□□ -0.59
UBE2AP49459 AC112497.1-201ENST00000624824 639 ntBASIC11.37□□□□□ -0.59
UBE2AP49459 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC11.37□□□□□ -0.59
UBE2AP49459 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
UBE2AP49459 GLDC-219ENST00000640208 420 ntTSL 2 BASIC11.37□□□□□ -0.59
UBE2AP49459 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms