Protein–RNA interactions for Protein: P48960

CD97, CD97 antigen, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD97P48960 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CD97P48960 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD97P48960 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD97P48960 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD97P48960 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD97P48960 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD97P48960 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD97P48960 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD97P48960 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD97P48960 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD97P48960 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD97P48960 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD97P48960 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD97P48960 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD97P48960 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.21■□□□□ 0.35
CD97P48960 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD97P48960 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.21■□□□□ 0.35
CD97P48960 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD97P48960 AL162741.1-201ENST00000565563 1558 ntBASIC17.21■□□□□ 0.35
CD97P48960 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD97P48960 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD97P48960 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.21■□□□□ 0.35
CD97P48960 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD97P48960 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.21■□□□□ 0.35
CD97P48960 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.21■□□□□ 0.35
CD97P48960 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.21■□□□□ 0.35
CD97P48960 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.21■□□□□ 0.35
CD97P48960 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.21■□□□□ 0.35
CD97P48960 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD97P48960 LINC00896-202ENST00000609602 2128 ntBASIC17.21■□□□□ 0.35
CD97P48960 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CD97P48960 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD97P48960 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.21■□□□□ 0.35
CD97P48960 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD97P48960 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.21■□□□□ 0.34
CD97P48960 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CD97P48960 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
CD97P48960 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CD97P48960 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.21■□□□□ 0.34
CD97P48960 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.21■□□□□ 0.34
CD97P48960 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CD97P48960 KRT18P1-202ENST00000452408 1331 ntBASIC17.21■□□□□ 0.34
CD97P48960 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.21■□□□□ 0.34
CD97P48960 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CD97P48960 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CD97P48960 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.2■□□□□ 0.34
CD97P48960 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CD97P48960 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CD97P48960 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CD97P48960 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CD97P48960 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.2■□□□□ 0.34
CD97P48960 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CD97P48960 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.2■□□□□ 0.34
CD97P48960 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
CD97P48960 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CD97P48960 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CD97P48960 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD97P48960 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.2■□□□□ 0.34
CD97P48960 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.2■□□□□ 0.34
CD97P48960 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CD97P48960 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD97P48960 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CD97P48960 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD97P48960 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.19■□□□□ 0.34
CD97P48960 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.19■□□□□ 0.34
CD97P48960 AC080080.1-201ENST00000625121 2420 ntBASIC17.19■□□□□ 0.34
CD97P48960 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CD97P48960 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD97P48960 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD97P48960 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.19■□□□□ 0.34
CD97P48960 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD97P48960 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CD97P48960 AP002414.4-201ENST00000589764 1148 ntBASIC17.19■□□□□ 0.34
CD97P48960 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD97P48960 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.19■□□□□ 0.34
CD97P48960 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD97P48960 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CD97P48960 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD97P48960 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD97P48960 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD97P48960 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms