Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COPB2P35606 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COPB2P35606 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPB2P35606 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPB2P35606 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COPB2P35606 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
COPB2P35606 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.41■□□□□ 0.86
COPB2P35606 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COPB2P35606 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.41■□□□□ 0.86
COPB2P35606 MIR1233-2-201ENST00000408138 82 ntBASIC20.41■□□□□ 0.86
COPB2P35606 MIR1233-1-201ENST00000408722 82 ntBASIC20.41■□□□□ 0.86
COPB2P35606 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.41■□□□□ 0.86
COPB2P35606 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPB2P35606 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COPB2P35606 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
COPB2P35606 Z83851.2-201ENST00000609564 659 ntBASIC20.41■□□□□ 0.86
COPB2P35606 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.41■□□□□ 0.86
COPB2P35606 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPB2P35606 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.41■□□□□ 0.86
COPB2P35606 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COPB2P35606 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPB2P35606 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COPB2P35606 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.41■□□□□ 0.86
COPB2P35606 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COPB2P35606 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COPB2P35606 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPB2P35606 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPB2P35606 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COPB2P35606 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COPB2P35606 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
COPB2P35606 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COPB2P35606 MIR940-201ENST00000401276 94 ntBASIC20.4■□□□□ 0.86
COPB2P35606 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.4■□□□□ 0.86
COPB2P35606 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 AC005082.1-201ENST00000413042 2259 ntBASIC20.4■□□□□ 0.86
COPB2P35606 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
COPB2P35606 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
COPB2P35606 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.4■□□□□ 0.86
COPB2P35606 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 AD001527.2-201ENST00000622994 785 ntBASIC20.4■□□□□ 0.86
COPB2P35606 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
COPB2P35606 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPB2P35606 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
COPB2P35606 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
COPB2P35606 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COPB2P35606 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
COPB2P35606 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
COPB2P35606 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.39■□□□□ 0.85
COPB2P35606 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPB2P35606 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COPB2P35606 SIGLEC16-201ENST00000599858 1437 ntBASIC20.39■□□□□ 0.85
COPB2P35606 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPB2P35606 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
COPB2P35606 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPB2P35606 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPB2P35606 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPB2P35606 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COPB2P35606 MED15P5-201ENST00000423150 992 ntBASIC20.39■□□□□ 0.85
COPB2P35606 PRYP5-201ENST00000451909 266 ntBASIC20.39■□□□□ 0.85
COPB2P35606 RNA5SP415-201ENST00000517246 115 ntBASIC20.39■□□□□ 0.85
COPB2P35606 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
COPB2P35606 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.39■□□□□ 0.85
COPB2P35606 AC012640.2-201ENST00000561606 901 ntBASIC20.39■□□□□ 0.85
COPB2P35606 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.39■□□□□ 0.85
COPB2P35606 AC034105.1-201ENST00000563488 319 ntBASIC20.39■□□□□ 0.85
COPB2P35606 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.39■□□□□ 0.85
COPB2P35606 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPB2P35606 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.39■□□□□ 0.85
COPB2P35606 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPB2P35606 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.39■□□□□ 0.85
COPB2P35606 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.39■□□□□ 0.85
COPB2P35606 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPB2P35606 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
COPB2P35606 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
COPB2P35606 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPB2P35606 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPB2P35606 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPB2P35606 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPB2P35606 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPB2P35606 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COPB2P35606 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COPB2P35606 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPB2P35606 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms