Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCN1P35523 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.4■□□□□ 0.86
CLCN1P35523 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN1P35523 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN1P35523 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN1P35523 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN1P35523 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN1P35523 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN1P35523 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN1P35523 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.4■□□□□ 0.86
CLCN1P35523 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN1P35523 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CLCN1P35523 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN1P35523 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN1P35523 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.4■□□□□ 0.86
CLCN1P35523 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.4■□□□□ 0.86
CLCN1P35523 AP002982.1-201ENST00000492365 877 ntBASIC20.4■□□□□ 0.86
CLCN1P35523 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.4■□□□□ 0.86
CLCN1P35523 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.4■□□□□ 0.86
CLCN1P35523 RARRES2P10-201ENST00000564312 460 ntBASIC20.4■□□□□ 0.86
CLCN1P35523 AF186192.3-201ENST00000583427 947 ntBASIC20.4■□□□□ 0.86
CLCN1P35523 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CLCN1P35523 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.4■□□□□ 0.86
CLCN1P35523 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.4■□□□□ 0.86
CLCN1P35523 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN1P35523 FAM197Y4-202ENST00000622692 608 ntBASIC20.4■□□□□ 0.86
CLCN1P35523 AC131212.4-201ENST00000623606 975 ntBASIC20.4■□□□□ 0.86
CLCN1P35523 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.4■□□□□ 0.86
CLCN1P35523 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN1P35523 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN1P35523 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN1P35523 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.4■□□□□ 0.86
CLCN1P35523 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLCN1P35523 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CLCN1P35523 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.39■□□□□ 0.86
CLCN1P35523 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
CLCN1P35523 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLCN1P35523 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN1P35523 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN1P35523 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN1P35523 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CLCN1P35523 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN1P35523 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CLCN1P35523 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CLCN1P35523 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN1P35523 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.39■□□□□ 0.85
CLCN1P35523 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN1P35523 AC142381.4-202ENST00000563973 229 ntBASIC20.39■□□□□ 0.85
CLCN1P35523 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.39■□□□□ 0.85
CLCN1P35523 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.39■□□□□ 0.85
CLCN1P35523 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CLCN1P35523 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.39■□□□□ 0.85
CLCN1P35523 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN1P35523 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.39■□□□□ 0.85
CLCN1P35523 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC20.39■□□□□ 0.85
CLCN1P35523 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN1P35523 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CLCN1P35523 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CLCN1P35523 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CLCN1P35523 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN1P35523 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN1P35523 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.39■□□□□ 0.85
CLCN1P35523 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN1P35523 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCN1P35523 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN1P35523 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN1P35523 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN1P35523 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN1P35523 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCN1P35523 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN1P35523 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN1P35523 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCN1P35523 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CLCN1P35523 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CLCN1P35523 ABHD17AP1-201ENST00000358206 933 ntBASIC20.38■□□□□ 0.85
CLCN1P35523 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCN1P35523 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.38■□□□□ 0.85
CLCN1P35523 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCN1P35523 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN1P35523 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCN1P35523 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.38■□□□□ 0.85
CLCN1P35523 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.38■□□□□ 0.85
CLCN1P35523 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.38■□□□□ 0.85
CLCN1P35523 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN1P35523 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CLCN1P35523 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CLCN1P35523 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN1P35523 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN1P35523 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCN1P35523 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCN1P35523 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN1P35523 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCN1P35523 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN1P35523 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN1P35523 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms