Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC8P31273 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC8P31273 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC8P31273 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXC8P31273 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC8P31273 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC8P31273 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC8P31273 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXC8P31273 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC8P31273 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC8P31273 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
HOXC8P31273 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC8P31273 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC8P31273 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXC8P31273 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HOXC8P31273 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC8P31273 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HOXC8P31273 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC8P31273 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXC8P31273 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC8P31273 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC8P31273 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC8P31273 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HOXC8P31273 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXC8P31273 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.42■□□□□ 0.7
HOXC8P31273 MCCD1P2-201ENST00000423228 335 ntBASIC19.42■□□□□ 0.7
HOXC8P31273 SIGLEC30P-201ENST00000455569 941 ntBASIC19.42■□□□□ 0.7
HOXC8P31273 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXC8P31273 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXC8P31273 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXC8P31273 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXC8P31273 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXC8P31273 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HOXC8P31273 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC8P31273 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXC8P31273 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXC8P31273 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC8P31273 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC8P31273 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC8P31273 AP000974.1-201ENST00000623909 2387 ntBASIC19.42■□□□□ 0.7
HOXC8P31273 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC8P31273 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC8P31273 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC8P31273 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXC8P31273 AC009949.1-201ENST00000623048 1830 ntBASIC19.41■□□□□ 0.7
HOXC8P31273 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC8P31273 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HOXC8P31273 BX276092.7-203ENST00000637198 1536 ntBASIC19.41■□□□□ 0.7
HOXC8P31273 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXC8P31273 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXC8P31273 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
HOXC8P31273 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC8P31273 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC8P31273 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC8P31273 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC8P31273 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC8P31273 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC8P31273 AC023274.1-201ENST00000418278 595 ntBASIC19.41■□□□□ 0.7
HOXC8P31273 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXC8P31273 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC8P31273 AC108073.2-201ENST00000464002 357 ntBASIC19.41■□□□□ 0.7
HOXC8P31273 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC8P31273 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC8P31273 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC8P31273 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC8P31273 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXC8P31273 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
HOXC8P31273 AC109462.3-201ENST00000573934 613 ntBASIC19.41■□□□□ 0.7
HOXC8P31273 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXC8P31273 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXC8P31273 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC8P31273 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC8P31273 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC8P31273 BX323043.1-201ENST00000641006 1765 ntBASIC19.41■□□□□ 0.7
HOXC8P31273 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC8P31273 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC8P31273 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC8P31273 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HOXC8P31273 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC8P31273 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HOXC8P31273 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXC8P31273 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXC8P31273 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HOXC8P31273 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC8P31273 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXC8P31273 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXC8P31273 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC8P31273 PRSS29P-201ENST00000440800 595 ntBASIC19.4■□□□□ 0.7
HOXC8P31273 HCG4B-203ENST00000450128 991 ntBASIC19.4■□□□□ 0.7
HOXC8P31273 AC004967.1-201ENST00000453589 447 ntBASIC19.4■□□□□ 0.7
HOXC8P31273 RPS15P9-201ENST00000494093 319 ntBASIC19.4■□□□□ 0.7
HOXC8P31273 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HOXC8P31273 MTDHP5-201ENST00000598980 586 ntBASIC19.4■□□□□ 0.7
HOXC8P31273 AC116407.2-201ENST00000613639 860 ntBASIC19.4■□□□□ 0.7
HOXC8P31273 AL805961.1-202ENST00000641562 540 ntBASIC19.4■□□□□ 0.7
HOXC8P31273 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC8P31273 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXC8P31273 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HOXC8P31273 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC8P31273 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms