Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.01■□□□□ 0.31
PTPN6P29350 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN6P29350 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN6P29350 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN6P29350 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN6P29350 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN6P29350 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN6P29350 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PTPN6P29350 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN6P29350 AC133963.1-201ENST00000504166 1679 ntBASIC17.01■□□□□ 0.31
PTPN6P29350 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PTPN6P29350 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PTPN6P29350 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17■□□□□ 0.31
PTPN6P29350 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17■□□□□ 0.31
PTPN6P29350 FAM8A6P-201ENST00000407496 1135 ntBASIC17■□□□□ 0.31
PTPN6P29350 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17■□□□□ 0.31
PTPN6P29350 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17■□□□□ 0.31
PTPN6P29350 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17■□□□□ 0.31
PTPN6P29350 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17■□□□□ 0.31
PTPN6P29350 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
PTPN6P29350 AL445228.2-201ENST00000605589 952 ntBASIC17■□□□□ 0.31
PTPN6P29350 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17■□□□□ 0.31
PTPN6P29350 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17■□□□□ 0.31
PTPN6P29350 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTPN6P29350 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17■□□□□ 0.31
PTPN6P29350 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
PTPN6P29350 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN6P29350 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PTPN6P29350 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PTPN6P29350 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN6P29350 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 AC012313.1-201ENST00000593393 3059 ntBASIC16.99■□□□□ 0.31
PTPN6P29350 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
PTPN6P29350 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.99■□□□□ 0.31
PTPN6P29350 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PTPN6P29350 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.99■□□□□ 0.31
PTPN6P29350 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.99■□□□□ 0.31
PTPN6P29350 KRT18P35-201ENST00000510488 1269 ntBASIC16.99■□□□□ 0.31
PTPN6P29350 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 GCSHP2-201ENST00000560971 527 ntBASIC16.99■□□□□ 0.31
PTPN6P29350 LINC01238-205ENST00000567549 1107 ntBASIC16.99■□□□□ 0.31
PTPN6P29350 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.99■□□□□ 0.31
PTPN6P29350 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 NTF6B-201ENST00000591913 560 ntBASIC16.99■□□□□ 0.31
PTPN6P29350 AC024243.1-201ENST00000609234 778 ntBASIC16.99■□□□□ 0.31
PTPN6P29350 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PTPN6P29350 LINC00602-201ENST00000629776 2065 ntBASIC16.99■□□□□ 0.31
PTPN6P29350 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN6P29350 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN6P29350 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PTPN6P29350 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.99■□□□□ 0.31
PTPN6P29350 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN6P29350 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.99■□□□□ 0.31
PTPN6P29350 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN6P29350 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PTPN6P29350 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN6P29350 AL138688.1-201ENST00000624851 1594 ntBASIC16.98■□□□□ 0.31
PTPN6P29350 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PTPN6P29350 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.98■□□□□ 0.31
PTPN6P29350 AP001094.4-201ENST00000579008 2176 ntBASIC16.98■□□□□ 0.31
PTPN6P29350 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN6P29350 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN6P29350 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN6P29350 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN6P29350 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN6P29350 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PTPN6P29350 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN6P29350 HOMER2P1-201ENST00000455653 964 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms