Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MMP8P22894 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.83■□□□□ 0.61
MMP8P22894 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.83■□□□□ 0.61
MMP8P22894 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MMP8P22894 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
MMP8P22894 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
MMP8P22894 REXO1L11P-201ENST00000620964 1927 ntBASIC18.83■□□□□ 0.6
MMP8P22894 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MMP8P22894 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
MMP8P22894 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.83■□□□□ 0.6
MMP8P22894 TSPY22P-201ENST00000427496 604 ntBASIC18.83■□□□□ 0.6
MMP8P22894 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.83■□□□□ 0.6
MMP8P22894 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.83■□□□□ 0.6
MMP8P22894 RN7SL606P-201ENST00000472779 293 ntBASIC18.83■□□□□ 0.6
MMP8P22894 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
MMP8P22894 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MMP8P22894 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.83■□□□□ 0.6
MMP8P22894 LINC00304-203ENST00000565008 1864 ntBASIC18.83■□□□□ 0.6
MMP8P22894 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.83■□□□□ 0.6
MMP8P22894 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MMP8P22894 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
MMP8P22894 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
MMP8P22894 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MMP8P22894 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
MMP8P22894 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
MMP8P22894 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MMP8P22894 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MMP8P22894 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP8P22894 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP8P22894 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.82■□□□□ 0.6
MMP8P22894 AC133963.1-201ENST00000504166 1679 ntBASIC18.82■□□□□ 0.6
MMP8P22894 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP8P22894 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP8P22894 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.82■□□□□ 0.6
MMP8P22894 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MMP8P22894 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MMP8P22894 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
MMP8P22894 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP8P22894 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.82■□□□□ 0.6
MMP8P22894 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.82■□□□□ 0.6
MMP8P22894 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.82■□□□□ 0.6
MMP8P22894 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP8P22894 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP8P22894 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP8P22894 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.82■□□□□ 0.6
MMP8P22894 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP8P22894 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP8P22894 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MMP8P22894 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MMP8P22894 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP8P22894 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
MMP8P22894 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MMP8P22894 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP8P22894 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP8P22894 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MMP8P22894 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP8P22894 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.81■□□□□ 0.6
MMP8P22894 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
MMP8P22894 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.81■□□□□ 0.6
MMP8P22894 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.81■□□□□ 0.6
MMP8P22894 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.81■□□□□ 0.6
MMP8P22894 FAM86EP-206ENST00000510506 987 ntBASIC18.81■□□□□ 0.6
MMP8P22894 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.81■□□□□ 0.6
MMP8P22894 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.81■□□□□ 0.6
MMP8P22894 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.81■□□□□ 0.6
MMP8P22894 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.81■□□□□ 0.6
MMP8P22894 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.81■□□□□ 0.6
MMP8P22894 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP8P22894 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP8P22894 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.81■□□□□ 0.6
MMP8P22894 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
MMP8P22894 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP8P22894 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.81■□□□□ 0.6
MMP8P22894 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MMP8P22894 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP8P22894 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MMP8P22894 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP8P22894 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MMP8P22894 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.81■□□□□ 0.6
MMP8P22894 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.8■□□□□ 0.6
MMP8P22894 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP8P22894 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP8P22894 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP8P22894 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
MMP8P22894 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP8P22894 AC005332.1-201ENST00000577698 1310 ntBASIC18.8■□□□□ 0.6
MMP8P22894 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP8P22894 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.8■□□□□ 0.6
MMP8P22894 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.8■□□□□ 0.6
MMP8P22894 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP8P22894 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP8P22894 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.8■□□□□ 0.6
MMP8P22894 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.8■□□□□ 0.6
MMP8P22894 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MMP8P22894 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.8■□□□□ 0.6
MMP8P22894 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP8P22894 AL353801.3-201ENST00000609898 542 ntBASIC18.8■□□□□ 0.6
MMP8P22894 AL590326.2-201ENST00000625139 305 ntBASIC18.8■□□□□ 0.6
MMP8P22894 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.8■□□□□ 0.6
MMP8P22894 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms