Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC130P13994 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC130P13994 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC130P13994 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC130P13994 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC130P13994 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC130P13994 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC130P13994 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC130P13994 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC130P13994 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC130P13994 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC130P13994 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC130P13994 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC130P13994 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC130P13994 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC130P13994 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC130P13994 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC130P13994 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC130P13994 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC130P13994 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC130P13994 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CCDC130P13994 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC130P13994 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC130P13994 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC130P13994 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CCDC130P13994 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC130P13994 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC130P13994 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC130P13994 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC130P13994 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC130P13994 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC130P13994 BNIP3P18-201ENST00000593976 575 ntBASIC18.96■□□□□ 0.63
CCDC130P13994 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC130P13994 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CCDC130P13994 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC130P13994 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC130P13994 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CCDC130P13994 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CCDC130P13994 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC130P13994 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCDC130P13994 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC130P13994 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC130P13994 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC130P13994 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CCDC130P13994 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC130P13994 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC130P13994 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC130P13994 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC130P13994 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC130P13994 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CCDC130P13994 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC130P13994 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC130P13994 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 AC125634.1-201ENST00000438758 1403 ntBASIC18.95■□□□□ 0.62
CCDC130P13994 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 NUS1P2-201ENST00000417358 873 ntBASIC18.95■□□□□ 0.62
CCDC130P13994 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC130P13994 AC096582.2-201ENST00000510860 516 ntBASIC18.95■□□□□ 0.62
CCDC130P13994 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.95■□□□□ 0.62
CCDC130P13994 AL138831.2-201ENST00000606564 490 ntBASIC18.95■□□□□ 0.62
CCDC130P13994 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.95■□□□□ 0.62
CCDC130P13994 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CCDC130P13994 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC130P13994 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC130P13994 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC130P13994 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC130P13994 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC130P13994 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC130P13994 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC130P13994 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC130P13994 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC130P13994 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC130P13994 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC130P13994 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CCDC130P13994 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC130P13994 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
CCDC130P13994 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC130P13994 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC130P13994 NUS1P1-201ENST00000446295 882 ntBASIC18.94■□□□□ 0.62
CCDC130P13994 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC130P13994 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC130P13994 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CCDC130P13994 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.94■□□□□ 0.62
CCDC130P13994 AL732292.2-201ENST00000609649 430 ntBASIC18.94■□□□□ 0.62
CCDC130P13994 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC130P13994 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms