Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
SRFP11831 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.03■□□□□ 0.48
SRFP11831 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SRFP11831 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRFP11831 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRFP11831 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRFP11831 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.02■□□□□ 0.48
SRFP11831 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.02■□□□□ 0.48
SRFP11831 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRFP11831 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SRFP11831 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.02■□□□□ 0.48
SRFP11831 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.02■□□□□ 0.48
SRFP11831 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRFP11831 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRFP11831 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRFP11831 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRFP11831 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRFP11831 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRFP11831 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.02■□□□□ 0.48
SRFP11831 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.02■□□□□ 0.48
SRFP11831 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.02■□□□□ 0.48
SRFP11831 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.02■□□□□ 0.48
SRFP11831 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.02■□□□□ 0.48
SRFP11831 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.02■□□□□ 0.48
SRFP11831 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SRFP11831 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.02■□□□□ 0.48
SRFP11831 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.02■□□□□ 0.48
SRFP11831 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.02■□□□□ 0.48
SRFP11831 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.02■□□□□ 0.48
SRFP11831 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SRFP11831 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.02■□□□□ 0.48
SRFP11831 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.02■□□□□ 0.48
SRFP11831 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
SRFP11831 GGTLC5P-201ENST00000617623 998 ntBASIC18.02■□□□□ 0.48
SRFP11831 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.02■□□□□ 0.48
SRFP11831 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SRFP11831 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SRFP11831 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SRFP11831 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.02■□□□□ 0.47
SRFP11831 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SRFP11831 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SRFP11831 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SRFP11831 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SRFP11831 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SRFP11831 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFP11831 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SRFP11831 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SRFP11831 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SRFP11831 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.01■□□□□ 0.47
SRFP11831 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SRFP11831 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.01■□□□□ 0.47
SRFP11831 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SRFP11831 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.01■□□□□ 0.47
SRFP11831 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFP11831 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFP11831 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFP11831 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.01■□□□□ 0.47
SRFP11831 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFP11831 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFP11831 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SRFP11831 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.01■□□□□ 0.47
SRFP11831 AC244107.1-201ENST00000442033 332 ntBASIC18.01■□□□□ 0.47
SRFP11831 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.01■□□□□ 0.47
SRFP11831 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.01■□□□□ 0.47
SRFP11831 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SRFP11831 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.01■□□□□ 0.47
SRFP11831 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFP11831 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
SRFP11831 AL513210.1-201ENST00000629608 234 ntBASIC18.01■□□□□ 0.47
SRFP11831 AC007064.4-201ENST00000637740 555 ntBASIC18.01■□□□□ 0.47
SRFP11831 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.01■□□□□ 0.47
SRFP11831 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFP11831 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.01■□□□□ 0.47
SRFP11831 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFP11831 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFP11831 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.01■□□□□ 0.47
SRFP11831 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18■□□□□ 0.47
SRFP11831 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRFP11831 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
SRFP11831 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18■□□□□ 0.47
SRFP11831 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRFP11831 AC025580.3-201ENST00000617932 1424 ntBASIC18■□□□□ 0.47
SRFP11831 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18■□□□□ 0.47
SRFP11831 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18■□□□□ 0.47
SRFP11831 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
SRFP11831 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRFP11831 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SRFP11831 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRFP11831 AP002414.1-201ENST00000391405 1147 ntBASIC18■□□□□ 0.47
SRFP11831 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18■□□□□ 0.47
SRFP11831 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18■□□□□ 0.47
SRFP11831 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18■□□□□ 0.47
SRFP11831 DUTP2-201ENST00000519164 463 ntBASIC18■□□□□ 0.47
SRFP11831 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18■□□□□ 0.47
SRFP11831 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18■□□□□ 0.47
SRFP11831 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18■□□□□ 0.47
SRFP11831 AC023141.13-201ENST00000604991 943 ntBASIC18■□□□□ 0.47
SRFP11831 AC093512.1-201ENST00000617969 520 ntBASIC18■□□□□ 0.47
SRFP11831 AC091812.2-201ENST00000619081 385 ntBASIC18■□□□□ 0.47
SRFP11831 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms