Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC31.09■■■□□ 2.57
TOP2AP11388 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC31.09■■■□□ 2.57
TOP2AP11388 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
TOP2AP11388 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC31.09■■■□□ 2.57
TOP2AP11388 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TOP2AP11388 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
TOP2AP11388 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
TOP2AP11388 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TOP2AP11388 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC31.08■■■□□ 2.57
TOP2AP11388 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
TOP2AP11388 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
TOP2AP11388 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TOP2AP11388 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TOP2AP11388 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
TOP2AP11388 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC31.08■■■□□ 2.57
TOP2AP11388 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC31.08■■■□□ 2.57
TOP2AP11388 AP002472.1-201ENST00000577490 586 ntBASIC31.08■■■□□ 2.57
TOP2AP11388 MIR3197-201ENST00000582241 73 ntBASIC31.08■■■□□ 2.57
TOP2AP11388 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TOP2AP11388 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC31.07■■■□□ 2.56
TOP2AP11388 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC31.07■■■□□ 2.56
TOP2AP11388 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TOP2AP11388 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TOP2AP11388 BX276092.7-203ENST00000637198 1536 ntBASIC31.07■■■□□ 2.56
TOP2AP11388 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
TOP2AP11388 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC31.07■■■□□ 2.56
TOP2AP11388 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
TOP2AP11388 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TOP2AP11388 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TOP2AP11388 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC31.07■■■□□ 2.56
TOP2AP11388 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
TOP2AP11388 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TOP2AP11388 TSEN15P1-201ENST00000423257 515 ntBASIC31.07■■■□□ 2.56
TOP2AP11388 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC31.07■■■□□ 2.56
TOP2AP11388 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC31.07■■■□□ 2.56
TOP2AP11388 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC31.07■■■□□ 2.56
TOP2AP11388 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TOP2AP11388 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC31.07■■■□□ 2.56
TOP2AP11388 AC096734.2-201ENST00000562054 433 ntBASIC31.07■■■□□ 2.56
TOP2AP11388 AC091812.2-201ENST00000619081 385 ntBASIC31.07■■■□□ 2.56
TOP2AP11388 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
TOP2AP11388 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TOP2AP11388 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC31.07■■■□□ 2.56
TOP2AP11388 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC31.07■■■□□ 2.56
TOP2AP11388 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TOP2AP11388 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
TOP2AP11388 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC31.06■■■□□ 2.56
TOP2AP11388 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
TOP2AP11388 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC31.06■■■□□ 2.56
TOP2AP11388 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TOP2AP11388 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TOP2AP11388 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TOP2AP11388 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC31.06■■■□□ 2.56
TOP2AP11388 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
TOP2AP11388 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC31.06■■■□□ 2.56
TOP2AP11388 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC31.06■■■□□ 2.56
TOP2AP11388 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
TOP2AP11388 STK19B-204ENST00000512515 211 ntBASIC31.06■■■□□ 2.56
TOP2AP11388 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC31.06■■■□□ 2.56
TOP2AP11388 AC004877.2-201ENST00000623941 599 ntBASIC31.06■■■□□ 2.56
TOP2AP11388 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
TOP2AP11388 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
TOP2AP11388 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
TOP2AP11388 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC31.06■■■□□ 2.56
TOP2AP11388 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
TOP2AP11388 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
TOP2AP11388 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
TOP2AP11388 AC002558.1-201ENST00000488906 803 ntBASIC31.05■■■□□ 2.56
TOP2AP11388 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC31.05■■■□□ 2.56
TOP2AP11388 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
TOP2AP11388 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC31.05■■■□□ 2.56
TOP2AP11388 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC31.05■■■□□ 2.56
TOP2AP11388 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
TOP2AP11388 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
TOP2AP11388 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
TOP2AP11388 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
TOP2AP11388 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
TOP2AP11388 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
TOP2AP11388 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
TOP2AP11388 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
TOP2AP11388 PTCHD3P3-201ENST00000403073 906 ntBASIC31.04■■■□□ 2.56
TOP2AP11388 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC31.04■■■□□ 2.56
TOP2AP11388 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
TOP2AP11388 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
TOP2AP11388 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC31.04■■■□□ 2.56
TOP2AP11388 RNF34-208ENST00000555076 593 ntTSL 3 BASIC31.04■■■□□ 2.56
TOP2AP11388 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
TOP2AP11388 AQP6-205ENST00000618286 829 ntTSL 5 BASIC31.04■■■□□ 2.56
TOP2AP11388 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
TOP2AP11388 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC31.04■■■□□ 2.56
TOP2AP11388 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC31.04■■■□□ 2.56
TOP2AP11388 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
TOP2AP11388 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC31.04■■■□□ 2.56
TOP2AP11388 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
TOP2AP11388 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
TOP2AP11388 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC31.04■■■□□ 2.56
TOP2AP11388 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC31.04■■■□□ 2.56
TOP2AP11388 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC31.04■■■□□ 2.56
TOP2AP11388 AL139400.1-201ENST00000366220 510 ntBASIC31.03■■■□□ 2.56
TOP2AP11388 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC31.03■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms