Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CD28P10747 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD28P10747 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14□□□□□ -0.17
CD28P10747 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CD28P10747 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CD28P10747 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14□□□□□ -0.17
CD28P10747 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CD28P10747 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14□□□□□ -0.17
CD28P10747 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CD28P10747 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14□□□□□ -0.17
CD28P10747 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14□□□□□ -0.17
CD28P10747 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14□□□□□ -0.17
CD28P10747 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 AL031284.1-201ENST00000419297 478 ntBASIC14□□□□□ -0.17
CD28P10747 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CD28P10747 KRT18P65-201ENST00000439811 1286 ntBASIC14□□□□□ -0.17
CD28P10747 RNA5SP419-201ENST00000515908 135 ntBASIC14□□□□□ -0.17
CD28P10747 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14□□□□□ -0.17
CD28P10747 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14□□□□□ -0.17
CD28P10747 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14□□□□□ -0.17
CD28P10747 AL138831.2-201ENST00000606564 490 ntBASIC14□□□□□ -0.17
CD28P10747 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14□□□□□ -0.17
CD28P10747 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CD28P10747 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CD28P10747 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
CD28P10747 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14□□□□□ -0.17
CD28P10747 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14□□□□□ -0.17
CD28P10747 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14□□□□□ -0.17
CD28P10747 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD28P10747 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14□□□□□ -0.17
CD28P10747 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.99□□□□□ -0.17
CD28P10747 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CD28P10747 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 IL9RP2-201ENST00000423948 1312 ntBASIC13.99□□□□□ -0.17
CD28P10747 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.99□□□□□ -0.17
CD28P10747 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CD28P10747 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.99□□□□□ -0.17
CD28P10747 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.99□□□□□ -0.17
CD28P10747 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.99□□□□□ -0.17
CD28P10747 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.99□□□□□ -0.17
CD28P10747 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.99□□□□□ -0.17
CD28P10747 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.99□□□□□ -0.17
CD28P10747 AP001269.4-201ENST00000609611 512 ntBASIC13.99□□□□□ -0.17
CD28P10747 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.99□□□□□ -0.17
CD28P10747 AL355877.3-201ENST00000622820 899 ntBASIC13.99□□□□□ -0.17
CD28P10747 AF228730.7-201ENST00000641842 219 ntBASIC13.99□□□□□ -0.17
CD28P10747 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.99□□□□□ -0.17
CD28P10747 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.99□□□□□ -0.17
CD28P10747 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CD28P10747 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD28P10747 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CD28P10747 AC125634.1-201ENST00000438758 1403 ntBASIC13.98□□□□□ -0.17
CD28P10747 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CD28P10747 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
CD28P10747 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms