Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SIRPAP1-201ENST00000448467 1770 ntBASIC23.64■■□□□ 1.37
CSB-PGBD3P0DP91 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CSB-PGBD3P0DP91 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CSB-PGBD3P0DP91 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CSB-PGBD3P0DP91 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
CSB-PGBD3P0DP91 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CSB-PGBD3P0DP91 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CSB-PGBD3P0DP91 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC23.64■■□□□ 1.37
CSB-PGBD3P0DP91 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CSB-PGBD3P0DP91 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CSB-PGBD3P0DP91 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 HTR5BP-201ENST00000430851 1154 ntBASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 PON3-205ENST00000451904 1053 ntTSL 3 BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 YBX1P5-201ENST00000509441 847 ntBASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 CYB561-217ENST00000582997 877 ntTSL 5 BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC23.63■■□□□ 1.37
CSB-PGBD3P0DP91 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 AC108073.2-201ENST00000464002 357 ntBASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 MAL2-202ENST00000531508 892 ntTSL 3 BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CSB-PGBD3P0DP91 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 AC116562.4-201ENST00000641316 2276 ntBASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 VN2R19P-201ENST00000442399 1052 ntBASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 CYMP-203ENST00000474680 1263 ntBASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 AL078644.1-201ENST00000609881 752 ntBASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CSB-PGBD3P0DP91 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 CD82-202ENST00000342935 967 ntTSL 5 BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 AC254562.1-201ENST00000417586 456 ntBASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 RFPL4AP1-201ENST00000530883 850 ntBASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 AL513190.1-201ENST00000621254 727 ntBASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSB-PGBD3P0DP91 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms