Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RBP1P09455 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RBP1P09455 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RBP1P09455 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RBP1P09455 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RBP1P09455 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RBP1P09455 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RBP1P09455 AC108860.2-201ENST00000562760 2183 ntBASIC17.67■□□□□ 0.42
RBP1P09455 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.67■□□□□ 0.42
RBP1P09455 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 LINC00602-201ENST00000629776 2065 ntBASIC17.67■□□□□ 0.42
RBP1P09455 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
RBP1P09455 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RBP1P09455 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.67■□□□□ 0.42
RBP1P09455 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.67■□□□□ 0.42
RBP1P09455 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 AL157888.1-201ENST00000631930 593 ntBASIC17.67■□□□□ 0.42
RBP1P09455 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.67■□□□□ 0.42
RBP1P09455 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RBP1P09455 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.67■□□□□ 0.42
RBP1P09455 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
RBP1P09455 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RBP1P09455 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
RBP1P09455 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RBP1P09455 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RBP1P09455 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RBP1P09455 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RBP1P09455 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
RBP1P09455 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.66■□□□□ 0.42
RBP1P09455 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.66■□□□□ 0.42
RBP1P09455 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RBP1P09455 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RBP1P09455 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RBP1P09455 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RBP1P09455 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RBP1P09455 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RBP1P09455 ECEL1P3-201ENST00000427961 737 ntBASIC17.66■□□□□ 0.42
RBP1P09455 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RBP1P09455 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.66■□□□□ 0.42
RBP1P09455 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.66■□□□□ 0.42
RBP1P09455 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.66■□□□□ 0.42
RBP1P09455 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.66■□□□□ 0.42
RBP1P09455 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RBP1P09455 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RBP1P09455 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.66■□□□□ 0.42
RBP1P09455 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
RBP1P09455 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.66■□□□□ 0.42
RBP1P09455 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RBP1P09455 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.66■□□□□ 0.42
RBP1P09455 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
RBP1P09455 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RBP1P09455 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RBP1P09455 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RBP1P09455 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RBP1P09455 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
RBP1P09455 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RBP1P09455 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RBP1P09455 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.65■□□□□ 0.42
RBP1P09455 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RBP1P09455 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RBP1P09455 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RBP1P09455 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RBP1P09455 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RBP1P09455 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RBP1P09455 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RBP1P09455 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RBP1P09455 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.65■□□□□ 0.42
RBP1P09455 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RBP1P09455 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RBP1P09455 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.65■□□□□ 0.42
RBP1P09455 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.65■□□□□ 0.42
RBP1P09455 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RBP1P09455 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RBP1P09455 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RBP1P09455 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RBP1P09455 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RBP1P09455 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RBP1P09455 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RBP1P09455 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RBP1P09455 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RBP1P09455 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.65■□□□□ 0.42
RBP1P09455 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RBP1P09455 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.65■□□□□ 0.42
RBP1P09455 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RBP1P09455 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms