Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP3P08254 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP3P08254 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP3P08254 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP3P08254 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
MMP3P08254 AP000974.1-201ENST00000623909 2387 ntBASIC19.73■□□□□ 0.75
MMP3P08254 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MMP3P08254 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP3P08254 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MMP3P08254 WIZP1-201ENST00000531444 2299 ntBASIC19.73■□□□□ 0.75
MMP3P08254 AC148477.5-201ENST00000625164 1645 ntBASIC19.73■□□□□ 0.75
MMP3P08254 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP3P08254 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.73■□□□□ 0.75
MMP3P08254 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
MMP3P08254 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MMP3P08254 YBX2P1-201ENST00000394192 760 ntBASIC19.73■□□□□ 0.75
MMP3P08254 UPF3AP3-201ENST00000420996 769 ntBASIC19.73■□□□□ 0.75
MMP3P08254 AC092183.1-201ENST00000469884 875 ntBASIC19.73■□□□□ 0.75
MMP3P08254 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.73■□□□□ 0.75
MMP3P08254 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.73■□□□□ 0.75
MMP3P08254 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.73■□□□□ 0.75
MMP3P08254 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.73■□□□□ 0.75
MMP3P08254 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.73■□□□□ 0.75
MMP3P08254 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.73■□□□□ 0.75
MMP3P08254 AL589182.2-201ENST00000619332 1049 ntBASIC19.73■□□□□ 0.75
MMP3P08254 AC055717.3-201ENST00000622967 595 ntBASIC19.73■□□□□ 0.75
MMP3P08254 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP3P08254 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.73■□□□□ 0.75
MMP3P08254 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
MMP3P08254 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MMP3P08254 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.73■□□□□ 0.75
MMP3P08254 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MMP3P08254 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
MMP3P08254 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MMP3P08254 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MMP3P08254 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP3P08254 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MMP3P08254 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP3P08254 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP3P08254 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP3P08254 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
MMP3P08254 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
MMP3P08254 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.72■□□□□ 0.75
MMP3P08254 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.72■□□□□ 0.75
MMP3P08254 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.72■□□□□ 0.75
MMP3P08254 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.72■□□□□ 0.75
MMP3P08254 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.72■□□□□ 0.75
MMP3P08254 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.72■□□□□ 0.75
MMP3P08254 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.72■□□□□ 0.75
MMP3P08254 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.72■□□□□ 0.75
MMP3P08254 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP3P08254 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MMP3P08254 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
MMP3P08254 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
MMP3P08254 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP3P08254 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP3P08254 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.71■□□□□ 0.75
MMP3P08254 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP3P08254 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
MMP3P08254 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP3P08254 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.71■□□□□ 0.75
MMP3P08254 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP3P08254 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP3P08254 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP3P08254 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP3P08254 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP3P08254 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP3P08254 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP3P08254 RPSAP43-201ENST00000402237 625 ntBASIC19.71■□□□□ 0.75
MMP3P08254 GPX1P2-201ENST00000429271 606 ntBASIC19.71■□□□□ 0.75
MMP3P08254 AC108751.1-201ENST00000490852 363 ntBASIC19.71■□□□□ 0.75
MMP3P08254 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.71■□□□□ 0.75
MMP3P08254 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.71■□□□□ 0.75
MMP3P08254 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.71■□□□□ 0.75
MMP3P08254 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.71■□□□□ 0.75
MMP3P08254 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.71■□□□□ 0.75
MMP3P08254 AC019129.2-201ENST00000609837 1235 ntBASIC19.71■□□□□ 0.75
MMP3P08254 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.71■□□□□ 0.75
MMP3P08254 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP3P08254 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.71■□□□□ 0.75
MMP3P08254 AC100803.2-201ENST00000562459 1963 ntBASIC19.71■□□□□ 0.75
MMP3P08254 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP3P08254 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP3P08254 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MMP3P08254 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.71■□□□□ 0.75
MMP3P08254 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.71■□□□□ 0.75
MMP3P08254 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP3P08254 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP3P08254 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP3P08254 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MMP3P08254 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP3P08254 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP3P08254 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP3P08254 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP3P08254 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.7■□□□□ 0.74
MMP3P08254 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MMP3P08254 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP3P08254 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP3P08254 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP3P08254 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms