Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.59■□□□□ 0.09
SFTPBP07988 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SFTPBP07988 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SFTPBP07988 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SFTPBP07988 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
SFTPBP07988 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SFTPBP07988 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.59■□□□□ 0.09
SFTPBP07988 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.59■□□□□ 0.09
SFTPBP07988 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
SFTPBP07988 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SFTPBP07988 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SFTPBP07988 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.59■□□□□ 0.09
SFTPBP07988 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SFTPBP07988 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.59■□□□□ 0.09
SFTPBP07988 CR769767.2-201ENST00000622735 460 ntBASIC15.59■□□□□ 0.09
SFTPBP07988 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SFTPBP07988 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.59■□□□□ 0.09
SFTPBP07988 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SFTPBP07988 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SFTPBP07988 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.59■□□□□ 0.09
SFTPBP07988 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SFTPBP07988 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SFTPBP07988 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
SFTPBP07988 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SFTPBP07988 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.59■□□□□ 0.09
SFTPBP07988 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.59■□□□□ 0.09
SFTPBP07988 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SFTPBP07988 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
SFTPBP07988 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SFTPBP07988 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
SFTPBP07988 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SFTPBP07988 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SFTPBP07988 HOXB1-202ENST00000577092 1414 ntBASIC15.59■□□□□ 0.09
SFTPBP07988 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SFTPBP07988 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
SFTPBP07988 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SFTPBP07988 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SFTPBP07988 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.58■□□□□ 0.09
SFTPBP07988 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
SFTPBP07988 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SFTPBP07988 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SFTPBP07988 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SFTPBP07988 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SFTPBP07988 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.58■□□□□ 0.08
SFTPBP07988 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SFTPBP07988 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SFTPBP07988 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SFTPBP07988 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SFTPBP07988 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SFTPBP07988 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SFTPBP07988 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.58■□□□□ 0.08
SFTPBP07988 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SFTPBP07988 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.58■□□□□ 0.08
SFTPBP07988 KRT18P23-201ENST00000435622 1283 ntBASIC15.58■□□□□ 0.08
SFTPBP07988 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.58■□□□□ 0.08
SFTPBP07988 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SFTPBP07988 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
SFTPBP07988 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.58■□□□□ 0.08
SFTPBP07988 AL049597.2-201ENST00000565575 961 ntBASIC15.58■□□□□ 0.08
SFTPBP07988 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.58■□□□□ 0.08
SFTPBP07988 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
SFTPBP07988 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.58■□□□□ 0.08
SFTPBP07988 AC010653.2-201ENST00000623505 997 ntBASIC15.58■□□□□ 0.08
SFTPBP07988 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SFTPBP07988 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SFTPBP07988 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SFTPBP07988 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SFTPBP07988 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.58■□□□□ 0.08
SFTPBP07988 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SFTPBP07988 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SFTPBP07988 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.58■□□□□ 0.08
SFTPBP07988 AC009102.3-201ENST00000623118 1491 ntBASIC15.58■□□□□ 0.08
SFTPBP07988 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SFTPBP07988 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SFTPBP07988 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SFTPBP07988 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.58■□□□□ 0.08
SFTPBP07988 AC134043.2-201ENST00000624206 2238 ntBASIC15.58■□□□□ 0.08
SFTPBP07988 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
SFTPBP07988 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.57■□□□□ 0.08
SFTPBP07988 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.57■□□□□ 0.08
SFTPBP07988 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.57■□□□□ 0.08
SFTPBP07988 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.57■□□□□ 0.08
SFTPBP07988 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 WWOX-216ENST00000569818 525 ntBASIC15.57■□□□□ 0.08
SFTPBP07988 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.57■□□□□ 0.08
SFTPBP07988 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 LINC00896-202ENST00000609602 2128 ntBASIC15.57■□□□□ 0.08
SFTPBP07988 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.57■□□□□ 0.08
SFTPBP07988 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SFTPBP07988 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms