Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.55■□□□□ 0.88
MBD3O95983 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3O95983 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3O95983 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3O95983 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3O95983 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MBD3O95983 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MBD3O95983 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3O95983 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.55■□□□□ 0.88
MBD3O95983 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3O95983 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.55■□□□□ 0.88
MBD3O95983 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3O95983 PCDHB19P-201ENST00000570871 2371 ntBASIC20.55■□□□□ 0.88
MBD3O95983 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3O95983 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.55■□□□□ 0.88
MBD3O95983 MIR3180-4-201ENST00000582223 153 ntBASIC20.55■□□□□ 0.88
MBD3O95983 MIR4674-201ENST00000582457 87 ntBASIC20.55■□□□□ 0.88
MBD3O95983 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
MBD3O95983 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.55■□□□□ 0.88
MBD3O95983 AC105020.1-201ENST00000435356 2205 ntBASIC20.55■□□□□ 0.88
MBD3O95983 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3O95983 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.55■□□□□ 0.88
MBD3O95983 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3O95983 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3O95983 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
MBD3O95983 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3O95983 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3O95983 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
MBD3O95983 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MBD3O95983 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD3O95983 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD3O95983 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD3O95983 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.54■□□□□ 0.88
MBD3O95983 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.54■□□□□ 0.88
MBD3O95983 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.54■□□□□ 0.88
MBD3O95983 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.54■□□□□ 0.88
MBD3O95983 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD3O95983 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD3O95983 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
MBD3O95983 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
MBD3O95983 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD3O95983 UBALD1-205ENST00000590891 2641 ntBASIC20.54■□□□□ 0.88
MBD3O95983 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD3O95983 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD3O95983 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.54■□□□□ 0.88
MBD3O95983 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MBD3O95983 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MBD3O95983 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MBD3O95983 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.53■□□□□ 0.88
MBD3O95983 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MBD3O95983 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MBD3O95983 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MBD3O95983 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
MBD3O95983 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.53■□□□□ 0.88
MBD3O95983 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MBD3O95983 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MBD3O95983 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MBD3O95983 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.53■□□□□ 0.88
MBD3O95983 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MBD3O95983 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
MBD3O95983 MFAP1P1-201ENST00000442257 1255 ntBASIC20.53■□□□□ 0.88
MBD3O95983 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
MBD3O95983 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.53■□□□□ 0.88
MBD3O95983 RN7SL471P-201ENST00000580476 299 ntBASIC20.53■□□□□ 0.88
MBD3O95983 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.53■□□□□ 0.88
MBD3O95983 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
MBD3O95983 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.53■□□□□ 0.88
MBD3O95983 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
MBD3O95983 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MBD3O95983 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
MBD3O95983 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MBD3O95983 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
MBD3O95983 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MBD3O95983 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MBD3O95983 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MBD3O95983 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
MBD3O95983 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
MBD3O95983 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
MBD3O95983 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.52■□□□□ 0.88
MBD3O95983 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
MBD3O95983 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MBD3O95983 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
MBD3O95983 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.52■□□□□ 0.88
MBD3O95983 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.52■□□□□ 0.88
MBD3O95983 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MBD3O95983 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MBD3O95983 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.52■□□□□ 0.88
MBD3O95983 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.52■□□□□ 0.88
MBD3O95983 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.52■□□□□ 0.88
MBD3O95983 AF186192.3-201ENST00000583427 947 ntBASIC20.52■□□□□ 0.88
MBD3O95983 DGCR10-201ENST00000609839 495 ntBASIC20.52■□□□□ 0.88
MBD3O95983 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
MBD3O95983 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
MBD3O95983 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MBD3O95983 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MBD3O95983 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.52■□□□□ 0.87
MBD3O95983 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.52■□□□□ 0.87
MBD3O95983 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
MBD3O95983 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.52■□□□□ 0.87
MBD3O95983 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms