Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.61■□□□□ 0.09
UPK1BO75841 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK1BO75841 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
UPK1BO75841 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK1BO75841 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.61■□□□□ 0.09
UPK1BO75841 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK1BO75841 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
UPK1BO75841 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
UPK1BO75841 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
UPK1BO75841 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 EDA-201ENST00000338901 1233 ntBASIC15.61■□□□□ 0.09
UPK1BO75841 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
UPK1BO75841 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.61■□□□□ 0.09
UPK1BO75841 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
UPK1BO75841 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.61■□□□□ 0.09
UPK1BO75841 AF213884.3-201ENST00000563833 479 ntBASIC15.61■□□□□ 0.09
UPK1BO75841 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK1BO75841 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
UPK1BO75841 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.61■□□□□ 0.09
UPK1BO75841 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK1BO75841 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
UPK1BO75841 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
UPK1BO75841 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
UPK1BO75841 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.61■□□□□ 0.09
UPK1BO75841 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
UPK1BO75841 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
UPK1BO75841 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 AC079328.2-201ENST00000561241 3354 ntBASIC15.61■□□□□ 0.09
UPK1BO75841 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1BO75841 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1BO75841 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1BO75841 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1BO75841 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1BO75841 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.6■□□□□ 0.09
UPK1BO75841 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1BO75841 AC092384.3-202ENST00000564646 2873 ntBASIC15.6■□□□□ 0.09
UPK1BO75841 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1BO75841 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1BO75841 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1BO75841 KRT19P1-201ENST00000405746 1186 ntBASIC15.6■□□□□ 0.09
UPK1BO75841 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1BO75841 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1BO75841 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.6■□□□□ 0.09
UPK1BO75841 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
UPK1BO75841 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
UPK1BO75841 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1BO75841 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1BO75841 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1BO75841 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
UPK1BO75841 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.6■□□□□ 0.09
UPK1BO75841 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1BO75841 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.6■□□□□ 0.09
UPK1BO75841 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1BO75841 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.59■□□□□ 0.09
UPK1BO75841 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1BO75841 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.59■□□□□ 0.09
UPK1BO75841 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
UPK1BO75841 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1BO75841 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1BO75841 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
UPK1BO75841 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1BO75841 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1BO75841 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1BO75841 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.59■□□□□ 0.09
UPK1BO75841 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1BO75841 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.59■□□□□ 0.09
UPK1BO75841 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
UPK1BO75841 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1BO75841 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
UPK1BO75841 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1BO75841 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.59■□□□□ 0.09
UPK1BO75841 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.59■□□□□ 0.09
UPK1BO75841 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.59■□□□□ 0.09
UPK1BO75841 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.59■□□□□ 0.09
UPK1BO75841 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1BO75841 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1BO75841 AC116353.5-201ENST00000638148 1699 ntBASIC15.59■□□□□ 0.09
UPK1BO75841 AL662844.4-201ENST00000606367 2838 ntBASIC15.59■□□□□ 0.09
UPK1BO75841 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1BO75841 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1BO75841 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
UPK1BO75841 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1BO75841 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
UPK1BO75841 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1BO75841 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms