Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSNA1O43805 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSNA1O43805 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSNA1O43805 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
SSNA1O43805 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SSNA1O43805 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSNA1O43805 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSNA1O43805 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SSNA1O43805 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.29■□□□□ 0.04
SSNA1O43805 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.29■□□□□ 0.04
SSNA1O43805 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.29■□□□□ 0.04
SSNA1O43805 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SSNA1O43805 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.29■□□□□ 0.04
SSNA1O43805 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSNA1O43805 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.29■□□□□ 0.04
SSNA1O43805 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SSNA1O43805 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.29■□□□□ 0.04
SSNA1O43805 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSNA1O43805 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSNA1O43805 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SSNA1O43805 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.29■□□□□ 0.04
SSNA1O43805 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.29■□□□□ 0.04
SSNA1O43805 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.29■□□□□ 0.04
SSNA1O43805 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.29■□□□□ 0.04
SSNA1O43805 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSNA1O43805 AC133963.1-201ENST00000504166 1679 ntBASIC15.28■□□□□ 0.04
SSNA1O43805 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.28■□□□□ 0.04
SSNA1O43805 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SSNA1O43805 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SSNA1O43805 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 AL603756.1-201ENST00000606511 2163 ntBASIC15.28■□□□□ 0.04
SSNA1O43805 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SSNA1O43805 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SSNA1O43805 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
SSNA1O43805 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SSNA1O43805 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.28■□□□□ 0.04
SSNA1O43805 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SSNA1O43805 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 GPX1P1-201ENST00000388829 606 ntBASIC15.28■□□□□ 0.04
SSNA1O43805 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SSNA1O43805 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.28■□□□□ 0.04
SSNA1O43805 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.28■□□□□ 0.04
SSNA1O43805 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.28■□□□□ 0.04
SSNA1O43805 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.28■□□□□ 0.04
SSNA1O43805 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.28■□□□□ 0.04
SSNA1O43805 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.28■□□□□ 0.04
SSNA1O43805 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 PCDHB17P-201ENST00000539533 2393 ntBASIC15.28■□□□□ 0.04
SSNA1O43805 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SSNA1O43805 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SSNA1O43805 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.28■□□□□ 0.04
SSNA1O43805 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SSNA1O43805 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSNA1O43805 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSNA1O43805 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.27■□□□□ 0.04
SSNA1O43805 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.27■□□□□ 0.04
SSNA1O43805 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSNA1O43805 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.27■□□□□ 0.04
SSNA1O43805 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSNA1O43805 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.27■□□□□ 0.04
SSNA1O43805 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.27■□□□□ 0.04
SSNA1O43805 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSNA1O43805 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSNA1O43805 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSNA1O43805 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.27■□□□□ 0.04
SSNA1O43805 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSNA1O43805 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SSNA1O43805 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSNA1O43805 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SSNA1O43805 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSNA1O43805 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSNA1O43805 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSNA1O43805 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms