Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC080080.1-201ENST00000625121 2420 ntBASIC17.84■□□□□ 0.45
PHGDHO43175 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PHGDHO43175 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.84■□□□□ 0.45
PHGDHO43175 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PHGDHO43175 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.84■□□□□ 0.45
PHGDHO43175 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
PHGDHO43175 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PHGDHO43175 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 PKD1P1-201ENST00000458669 6805 ntBASIC17.84■□□□□ 0.45
PHGDHO43175 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 PVRIG2P-201ENST00000435460 978 ntBASIC17.84■□□□□ 0.45
PHGDHO43175 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PHGDHO43175 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.84■□□□□ 0.45
PHGDHO43175 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHGDHO43175 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.84■□□□□ 0.45
PHGDHO43175 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.83■□□□□ 0.45
PHGDHO43175 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PHGDHO43175 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
PHGDHO43175 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PHGDHO43175 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PHGDHO43175 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PHGDHO43175 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.83■□□□□ 0.45
PHGDHO43175 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
PHGDHO43175 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.83■□□□□ 0.44
PHGDHO43175 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PHGDHO43175 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PHGDHO43175 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.83■□□□□ 0.44
PHGDHO43175 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PHGDHO43175 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PHGDHO43175 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.83■□□□□ 0.44
PHGDHO43175 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PHGDHO43175 AC093827.2-201ENST00000512654 315 ntBASIC17.83■□□□□ 0.44
PHGDHO43175 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.83■□□□□ 0.44
PHGDHO43175 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.83■□□□□ 0.44
PHGDHO43175 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PHGDHO43175 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PHGDHO43175 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PHGDHO43175 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PHGDHO43175 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PHGDHO43175 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.82■□□□□ 0.44
PHGDHO43175 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.82■□□□□ 0.44
PHGDHO43175 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.82■□□□□ 0.44
PHGDHO43175 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.82■□□□□ 0.44
PHGDHO43175 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PHGDHO43175 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PHGDHO43175 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.82■□□□□ 0.44
PHGDHO43175 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PHGDHO43175 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.82■□□□□ 0.44
PHGDHO43175 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.82■□□□□ 0.44
PHGDHO43175 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.82■□□□□ 0.44
PHGDHO43175 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.82■□□□□ 0.44
PHGDHO43175 GCSHP2-201ENST00000560971 527 ntBASIC17.82■□□□□ 0.44
PHGDHO43175 AC141257.4-201ENST00000634557 245 ntBASIC17.82■□□□□ 0.44
PHGDHO43175 AC136944.6-201ENST00000634818 245 ntBASIC17.82■□□□□ 0.44
PHGDHO43175 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.82■□□□□ 0.44
PHGDHO43175 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PHGDHO43175 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PHGDHO43175 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PHGDHO43175 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHGDHO43175 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PHGDHO43175 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHGDHO43175 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PHGDHO43175 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHGDHO43175 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHGDHO43175 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHGDHO43175 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHGDHO43175 KRT18P22-201ENST00000402024 1347 ntBASIC17.81■□□□□ 0.44
PHGDHO43175 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.81■□□□□ 0.44
PHGDHO43175 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PHGDHO43175 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms