Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXN1O15353 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.36■■□□□ 1.01
FOXN1O15353 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
FOXN1O15353 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.36■■□□□ 1.01
FOXN1O15353 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
FOXN1O15353 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.36■■□□□ 1.01
FOXN1O15353 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXN1O15353 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXN1O15353 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.36■■□□□ 1.01
FOXN1O15353 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.36■■□□□ 1.01
FOXN1O15353 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
FOXN1O15353 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.36■■□□□ 1.01
FOXN1O15353 AC064836.3-201ENST00000607928 673 ntBASIC21.36■■□□□ 1.01
FOXN1O15353 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
FOXN1O15353 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
FOXN1O15353 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.36■■□□□ 1.01
FOXN1O15353 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
FOXN1O15353 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXN1O15353 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXN1O15353 Z98044.1-201ENST00000632503 1764 ntBASIC21.36■■□□□ 1.01
FOXN1O15353 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXN1O15353 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
FOXN1O15353 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXN1O15353 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
FOXN1O15353 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.35■■□□□ 1.01
FOXN1O15353 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
FOXN1O15353 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
FOXN1O15353 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
FOXN1O15353 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXN1O15353 AC245100.3-201ENST00000441281 285 ntBASIC21.35■■□□□ 1.01
FOXN1O15353 AC022494.1-201ENST00000466044 728 ntBASIC21.35■■□□□ 1.01
FOXN1O15353 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
FOXN1O15353 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.35■■□□□ 1.01
FOXN1O15353 AC027612.4-201ENST00000605371 583 ntBASIC21.35■■□□□ 1.01
FOXN1O15353 AL008721.1-201ENST00000609964 604 ntBASIC21.35■■□□□ 1.01
FOXN1O15353 AC012645.4-201ENST00000610691 1061 ntBASIC21.35■■□□□ 1.01
FOXN1O15353 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXN1O15353 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
FOXN1O15353 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
FOXN1O15353 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.35■■□□□ 1.01
FOXN1O15353 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXN1O15353 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
FOXN1O15353 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXN1O15353 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXN1O15353 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXN1O15353 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXN1O15353 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXN1O15353 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
FOXN1O15353 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
FOXN1O15353 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
FOXN1O15353 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
FOXN1O15353 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.34■■□□□ 1.01
FOXN1O15353 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
FOXN1O15353 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXN1O15353 TP73-AS1-210ENST00000637775 1455 ntBASIC21.34■■□□□ 1.01
FOXN1O15353 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
FOXN1O15353 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXN1O15353 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.34■■□□□ 1.01
FOXN1O15353 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
FOXN1O15353 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.34■■□□□ 1.01
FOXN1O15353 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.34■■□□□ 1.01
FOXN1O15353 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.34■■□□□ 1.01
FOXN1O15353 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.34■■□□□ 1.01
FOXN1O15353 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
FOXN1O15353 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.34■■□□□ 1.01
FOXN1O15353 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
FOXN1O15353 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXN1O15353 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
FOXN1O15353 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
FOXN1O15353 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
FOXN1O15353 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
FOXN1O15353 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FOXN1O15353 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
FOXN1O15353 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
FOXN1O15353 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
FOXN1O15353 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
FOXN1O15353 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.33■■□□□ 1.01
FOXN1O15353 PRSS29P-201ENST00000440800 595 ntBASIC21.33■■□□□ 1.01
FOXN1O15353 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FOXN1O15353 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.33■■□□□ 1.01
FOXN1O15353 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.33■■□□□ 1.01
FOXN1O15353 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.33■■□□□ 1
FOXN1O15353 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
FOXN1O15353 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
FOXN1O15353 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
FOXN1O15353 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
FOXN1O15353 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.32■■□□□ 1
FOXN1O15353 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FOXN1O15353 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
FOXN1O15353 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
FOXN1O15353 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.32■■□□□ 1
FOXN1O15353 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
FOXN1O15353 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.32■■□□□ 1
FOXN1O15353 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.32■■□□□ 1
FOXN1O15353 AP005117.1-201ENST00000584346 1413 ntBASIC21.32■■□□□ 1
FOXN1O15353 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FOXN1O15353 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
FOXN1O15353 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.32■■□□□ 1
FOXN1O15353 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.32■■□□□ 1
FOXN1O15353 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms