Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPC1O15118 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPC1O15118 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPC1O15118 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NPC1O15118 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
NPC1O15118 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NPC1O15118 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.02■□□□□ 0.48
NPC1O15118 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.02■□□□□ 0.48
NPC1O15118 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
NPC1O15118 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPC1O15118 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPC1O15118 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPC1O15118 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NPC1O15118 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.02■□□□□ 0.48
NPC1O15118 COX5BP2-201ENST00000392354 334 ntBASIC18.02■□□□□ 0.48
NPC1O15118 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.02■□□□□ 0.48
NPC1O15118 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.02■□□□□ 0.48
NPC1O15118 PMPCAP1-201ENST00000508114 1576 ntBASIC18.02■□□□□ 0.48
NPC1O15118 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NPC1O15118 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.02■□□□□ 0.48
NPC1O15118 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.02■□□□□ 0.48
NPC1O15118 NKAPP1-205ENST00000585790 367 ntBASIC18.02■□□□□ 0.48
NPC1O15118 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.02■□□□□ 0.48
NPC1O15118 GPALPP1-207ENST00000611650 899 ntBASIC18.02■□□□□ 0.48
NPC1O15118 AC073592.4-201ENST00000623827 446 ntBASIC18.02■□□□□ 0.48
NPC1O15118 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
NPC1O15118 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
NPC1O15118 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NPC1O15118 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
NPC1O15118 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NPC1O15118 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
NPC1O15118 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.02■□□□□ 0.47
NPC1O15118 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NPC1O15118 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.02■□□□□ 0.47
NPC1O15118 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.02■□□□□ 0.47
NPC1O15118 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 AC079776.2-201ENST00000641154 1609 ntBASIC18.01■□□□□ 0.47
NPC1O15118 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
NPC1O15118 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.01■□□□□ 0.47
NPC1O15118 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NPC1O15118 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NPC1O15118 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.01■□□□□ 0.47
NPC1O15118 PRYP5-201ENST00000451909 266 ntBASIC18.01■□□□□ 0.47
NPC1O15118 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NPC1O15118 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.01■□□□□ 0.47
NPC1O15118 SLC25A1P1-201ENST00000528351 927 ntBASIC18.01■□□□□ 0.47
NPC1O15118 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.01■□□□□ 0.47
NPC1O15118 AC145285.3-201ENST00000564603 959 ntBASIC18.01■□□□□ 0.47
NPC1O15118 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.01■□□□□ 0.47
NPC1O15118 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 AC025062.2-201ENST00000605477 670 ntBASIC18.01■□□□□ 0.47
NPC1O15118 AD001527.2-201ENST00000622994 785 ntBASIC18.01■□□□□ 0.47
NPC1O15118 AC008735.5-201ENST00000623544 497 ntBASIC18.01■□□□□ 0.47
NPC1O15118 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NPC1O15118 AC107918.4-202ENST00000641623 219 ntBASIC18.01■□□□□ 0.47
NPC1O15118 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.01■□□□□ 0.47
NPC1O15118 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.01■□□□□ 0.47
NPC1O15118 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NPC1O15118 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPC1O15118 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NPC1O15118 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPC1O15118 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18■□□□□ 0.47
NPC1O15118 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18■□□□□ 0.47
NPC1O15118 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPC1O15118 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPC1O15118 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPC1O15118 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NPC1O15118 SIGLEC16-201ENST00000599858 1437 ntBASIC18■□□□□ 0.47
NPC1O15118 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NPC1O15118 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18■□□□□ 0.47
NPC1O15118 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18■□□□□ 0.47
NPC1O15118 LAGE3P1-201ENST00000425356 484 ntBASIC18■□□□□ 0.47
NPC1O15118 RPS2P1-201ENST00000434010 821 ntBASIC18■□□□□ 0.47
NPC1O15118 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18■□□□□ 0.47
NPC1O15118 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18■□□□□ 0.47
NPC1O15118 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPC1O15118 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18■□□□□ 0.47
NPC1O15118 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18■□□□□ 0.47
NPC1O15118 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18■□□□□ 0.47
NPC1O15118 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
NPC1O15118 MTDHP4-201ENST00000600287 670 ntBASIC18■□□□□ 0.47
NPC1O15118 AL049840.3-201ENST00000602669 611 ntBASIC18■□□□□ 0.47
NPC1O15118 AC116407.2-201ENST00000613639 860 ntBASIC18■□□□□ 0.47
NPC1O15118 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms