Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.1■□□□□ 0.33
PDLIM1O00151 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.1■□□□□ 0.33
PDLIM1O00151 PHGDH-209ENST00000641074 1780 ntBASIC17.1■□□□□ 0.33
PDLIM1O00151 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.1■□□□□ 0.33
PDLIM1O00151 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
PDLIM1O00151 FAM197Y1-201ENST00000421178 764 ntBASIC17.1■□□□□ 0.33
PDLIM1O00151 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.1■□□□□ 0.33
PDLIM1O00151 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PDLIM1O00151 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.1■□□□□ 0.33
PDLIM1O00151 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.1■□□□□ 0.33
PDLIM1O00151 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PDLIM1O00151 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.1■□□□□ 0.33
PDLIM1O00151 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.1■□□□□ 0.33
PDLIM1O00151 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.1■□□□□ 0.33
PDLIM1O00151 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM1O00151 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.09■□□□□ 0.33
PDLIM1O00151 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PDLIM1O00151 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 TSPY7P-201ENST00000431358 1114 ntBASIC17.09■□□□□ 0.33
PDLIM1O00151 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.09■□□□□ 0.33
PDLIM1O00151 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.09■□□□□ 0.33
PDLIM1O00151 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.09■□□□□ 0.33
PDLIM1O00151 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.09■□□□□ 0.33
PDLIM1O00151 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.09■□□□□ 0.33
PDLIM1O00151 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.09■□□□□ 0.33
PDLIM1O00151 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PDLIM1O00151 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.09■□□□□ 0.33
PDLIM1O00151 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.09■□□□□ 0.33
PDLIM1O00151 KRT16P1-201ENST00000399124 1418 ntBASIC17.09■□□□□ 0.33
PDLIM1O00151 KRT8P3-201ENST00000519669 1449 ntBASIC17.09■□□□□ 0.33
PDLIM1O00151 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PDLIM1O00151 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.09■□□□□ 0.33
PDLIM1O00151 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.09■□□□□ 0.33
PDLIM1O00151 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
PDLIM1O00151 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
PDLIM1O00151 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.09■□□□□ 0.33
PDLIM1O00151 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PDLIM1O00151 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.09■□□□□ 0.33
PDLIM1O00151 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM1O00151 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM1O00151 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM1O00151 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM1O00151 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM1O00151 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.08■□□□□ 0.33
PDLIM1O00151 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM1O00151 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.08■□□□□ 0.33
PDLIM1O00151 AC099343.3-201ENST00000605834 2503 ntBASIC17.08■□□□□ 0.33
PDLIM1O00151 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.08■□□□□ 0.33
PDLIM1O00151 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM1O00151 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM1O00151 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.08■□□□□ 0.33
PDLIM1O00151 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM1O00151 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM1O00151 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM1O00151 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM1O00151 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.08■□□□□ 0.32
PDLIM1O00151 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM1O00151 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.08■□□□□ 0.32
PDLIM1O00151 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms