Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
DDX39AO00148 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
DDX39AO00148 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX39AO00148 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
DDX39AO00148 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX39AO00148 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.13■□□□□ 0.81
DDX39AO00148 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.13■□□□□ 0.81
DDX39AO00148 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
DDX39AO00148 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.13■□□□□ 0.81
DDX39AO00148 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
DDX39AO00148 AC026396.1-201ENST00000419388 421 ntBASIC20.13■□□□□ 0.81
DDX39AO00148 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX39AO00148 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.13■□□□□ 0.81
DDX39AO00148 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.13■□□□□ 0.81
DDX39AO00148 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.13■□□□□ 0.81
DDX39AO00148 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
DDX39AO00148 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
DDX39AO00148 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
DDX39AO00148 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX39AO00148 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX39AO00148 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX39AO00148 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.12■□□□□ 0.81
DDX39AO00148 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX39AO00148 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.12■□□□□ 0.81
DDX39AO00148 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX39AO00148 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX39AO00148 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.12■□□□□ 0.81
DDX39AO00148 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX39AO00148 AC009533.2-201ENST00000543664 586 ntBASIC20.12■□□□□ 0.81
DDX39AO00148 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX39AO00148 AL031008.1-201ENST00000619963 541 ntBASIC20.12■□□□□ 0.81
DDX39AO00148 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX39AO00148 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.12■□□□□ 0.81
DDX39AO00148 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
DDX39AO00148 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX39AO00148 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX39AO00148 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX39AO00148 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
DDX39AO00148 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.11■□□□□ 0.81
DDX39AO00148 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX39AO00148 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX39AO00148 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX39AO00148 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX39AO00148 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX39AO00148 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX39AO00148 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.11■□□□□ 0.81
DDX39AO00148 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX39AO00148 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.11■□□□□ 0.81
DDX39AO00148 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX39AO00148 DUTP2-201ENST00000519164 463 ntBASIC20.11■□□□□ 0.81
DDX39AO00148 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
DDX39AO00148 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.11■□□□□ 0.81
DDX39AO00148 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.11■□□□□ 0.81
DDX39AO00148 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.11■□□□□ 0.81
DDX39AO00148 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.11■□□□□ 0.81
DDX39AO00148 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX39AO00148 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
DDX39AO00148 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
DDX39AO00148 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX39AO00148 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX39AO00148 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX39AO00148 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
DDX39AO00148 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX39AO00148 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.1■□□□□ 0.81
DDX39AO00148 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms