Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 REXO1L9P-201ENST00000604264 2108 ntBASIC13.12□□□□□ -0.31
NACAE9PAV3 AL023803.3-201ENST00000615559 522 ntBASIC13.12□□□□□ -0.31
NACAE9PAV3 CR769767.2-201ENST00000622735 460 ntBASIC13.12□□□□□ -0.31
NACAE9PAV3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.12□□□□□ -0.31
NACAE9PAV3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NACAE9PAV3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.12□□□□□ -0.31
NACAE9PAV3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NACAE9PAV3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NACAE9PAV3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.12□□□□□ -0.31
NACAE9PAV3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
NACAE9PAV3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.12□□□□□ -0.31
NACAE9PAV3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.12□□□□□ -0.31
NACAE9PAV3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.12□□□□□ -0.31
NACAE9PAV3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.12□□□□□ -0.31
NACAE9PAV3 AL138966.2-201ENST00000621997 464 ntBASIC13.12□□□□□ -0.31
NACAE9PAV3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.12□□□□□ -0.31
NACAE9PAV3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NACAE9PAV3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.12□□□□□ -0.31
NACAE9PAV3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.12□□□□□ -0.31
NACAE9PAV3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.12□□□□□ -0.31
NACAE9PAV3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NACAE9PAV3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.12□□□□□ -0.31
NACAE9PAV3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.12□□□□□ -0.31
NACAE9PAV3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NACAE9PAV3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.12□□□□□ -0.31
NACAE9PAV3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NACAE9PAV3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
NACAE9PAV3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NACAE9PAV3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.11□□□□□ -0.31
NACAE9PAV3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NACAE9PAV3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.11□□□□□ -0.31
NACAE9PAV3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 AC093010.1-201ENST00000473625 1624 ntBASIC13.11□□□□□ -0.31
NACAE9PAV3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.11□□□□□ -0.31
NACAE9PAV3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
NACAE9PAV3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NACAE9PAV3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.11□□□□□ -0.31
NACAE9PAV3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NACAE9PAV3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.11□□□□□ -0.31
NACAE9PAV3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NACAE9PAV3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.11□□□□□ -0.31
NACAE9PAV3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.11□□□□□ -0.31
NACAE9PAV3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
NACAE9PAV3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
NACAE9PAV3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 AL024508.2-201ENST00000607749 1894 ntBASIC13.11□□□□□ -0.31
NACAE9PAV3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 GMCL1P1-201ENST00000463439 1581 ntBASIC13.11□□□□□ -0.31
NACAE9PAV3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 FAM8A6P-201ENST00000407496 1135 ntBASIC13.11□□□□□ -0.31
NACAE9PAV3 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.11□□□□□ -0.31
NACAE9PAV3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NACAE9PAV3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.11□□□□□ -0.31
NACAE9PAV3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NACAE9PAV3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.11□□□□□ -0.31
NACAE9PAV3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.11□□□□□ -0.31
NACAE9PAV3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.11□□□□□ -0.31
NACAE9PAV3 LINC01238-205ENST00000567549 1107 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms