Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC132938.6-201ENST00000623828 1655 ntBASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 AC093010.1-201ENST00000473625 1624 ntBASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
IGHV4-28A0A0C4DH34 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 AC091304.2-201ENST00000564639 760 ntBASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 LINC01711-201ENST00000598340 967 ntBASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 AL121894.2-201ENST00000602977 491 ntBASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 AL732292.2-201ENST00000609649 430 ntBASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 AL353801.3-201ENST00000609898 542 ntBASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.94□□□□□ -0.34
IGHV4-28A0A0C4DH34 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 TSPY19P-201ENST00000418461 509 ntBASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 TSPY18P-201ENST00000441642 509 ntBASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 KRT18P31-201ENST00000506277 1292 ntBASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 AC096582.2-201ENST00000510860 516 ntBASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 IFNL4P1-201ENST00000607083 540 ntBASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 AC090164.3-201ENST00000610780 2143 ntBASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
IGHV4-28A0A0C4DH34 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
IGHV4-28A0A0C4DH34 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
IGHV4-28A0A0C4DH34 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms