Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 BNIP3P18-201ENST00000593976 575 ntBASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 AC135050.7-201ENST00000624508 2218 ntBASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX9Q9Y5X1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 NUS1P2-201ENST00000417358 873 ntBASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 TSPY19P-201ENST00000418461 509 ntBASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 TSPY18P-201ENST00000441642 509 ntBASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 AC096582.2-201ENST00000510860 516 ntBASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 AL138831.2-201ENST00000606564 490 ntBASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 AL732292.2-201ENST00000609649 430 ntBASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 AL121772.3-201ENST00000610840 674 ntBASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 KRT8P47-201ENST00000604727 1398 ntBASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 AC125634.1-201ENST00000438758 1403 ntBASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX9Q9Y5X1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 AC100803.2-201ENST00000562459 1963 ntBASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms