Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 AC073648.2-201ENST00000510116 352 ntBASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 SLC25A1P1-201ENST00000528351 927 ntBASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 AC106730.1-201ENST00000566722 1090 ntBASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGA9Q9Y5G4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 AC068880.1-201ENST00000507289 2297 ntBASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 MTMR9LP-203ENST00000426597 1545 ntBASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.75■□□□□ 0.27
PCDHGA9Q9Y5G4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 AC112777.1-201ENST00000540175 1423 ntBASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 SCARNA2-201ENST00000458748 420 ntBASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 AC009533.2-201ENST00000543664 586 ntBASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 AC139887.3-201ENST00000568585 713 ntBASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 AC148477.8-201ENST00000624298 468 ntBASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGA9Q9Y5G4 TP73-AS1-210ENST00000637775 1455 ntBASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms