Protein–RNA interactions for Protein: Q9Y4X3

CCL27, C-C motif chemokine 27, humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL27Q9Y4X3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCL27Q9Y4X3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL27Q9Y4X3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL27Q9Y4X3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL27Q9Y4X3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 AC092597.1-201ENST00000487352 616 ntBASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 AC022211.2-201ENST00000585075 2527 ntBASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCL27Q9Y4X3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 TERF1P1-201ENST00000311003 1181 ntBASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 YBX1P2-201ENST00000489612 999 ntBASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 AC139887.4-201ENST00000607877 719 ntBASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL27Q9Y4X3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCL27Q9Y4X3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCL27Q9Y4X3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCL27Q9Y4X3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCL27Q9Y4X3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CCL27Q9Y4X3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCL27Q9Y4X3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.08■□□□□ 0.33
CCL27Q9Y4X3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 AC113347.1-201ENST00000413321 391 ntBASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 KRT18P48-201ENST00000434763 852 ntBASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 BX664615.1-201ENST00000443558 458 ntBASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 AC112698.1-201ENST00000510299 916 ntBASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL27Q9Y4X3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL27Q9Y4X3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL27Q9Y4X3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL27Q9Y4X3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms